ncRNA ID | osa-miRf11013-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - GGUUUGCCGGAGUUGGAGGAGA - NA |
Stem-loop(if miRNA) |
   -GC    -       AG         UC  - CC   CCCCCUCCCCCUUCCACUCCCACCCCACCCCACCCC  GACCCUAACCCGU CCA   CAUC CCUCUAG  CCGGCGAAC  CU C  CUC                                    GG             A |||   |||| |||||||  |||||||||  || |  |||                                    || GGU   GUAG GGAGGUU  GGCCGUUUG  GA G  GAG                                    CG             G    ACA    A       GA         GA  A AA   ----------------------------------AC  CGGCCGCUCCUGG |
Stem-loop sequence | CCAGCCAUCCCUCUAGAGCCGGCGAACUCCUCCCCUCCCCCCUCCCCCUUCCACUCCCACCCCACCCCACCCCGGGACCCUAACCCGUAGGGUCCUCGCCGGCGCCAGAGAAGAAGAGGUUUGCCGGAGUUGGAGGAGAUGACAUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015778351.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group UPF0426 protein At1g28150, chloroplastic (LOC4336466), transcript variant X3, mRNA | UPF0426 protein At1g28150, chloroplastic(LOC4336466) | coding protein | psRNATarget | |||||||||
XM_015778352.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group UPF0426 protein At1g28150, chloroplastic (LOC4336466), transcript variant X4, mRNA | UPF0426 protein At1g28150, chloroplastic(LOC4336466) | coding protein | psRNATarget |