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BaseInfo

ncRNA ID novel_zma_miR14152
Species Zea mays
Class miRNA
Genome position Chr8:12839760-12839848 [-]
Reference genome RefGen_v4
Source SRR1583942
Length 22
Mature sequence(if miRNA) 68 - UUAAGUGCUACAUAUGUCGUGA - 89
Stem-loop(if miRNA) --      G  A    UGU     ----U   A     UCAGC   GU
  UUAAGU CU CAUA   CGUGA     UGG GAUCC     UGA  A
  |||||| || ||||   |||||     ||| |||||     |||
  AGUUCA GA GUAU   GCGCU     GCC CUAGG     GCU  U
CU      -  A    -UG     UCCAU   G     -CUUA   AA
Stem-loop sequence UUAAGUGCUACAUAUGUCGUGAUUGGAGAUCCUCAGCUGAGUAUAAUCGAUUCGGAUCGCCGUACCUUCGCGGUUAUGAAGACUUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT083847.2
ncRNA:22   AGUGCUGUAUACAUCGUGAAUU   1
  *|||||||||||||||||||||
targets:559   ACACGACAUAUGUAGCACUUAA   580

0.0 Zea mays full-length cDNA clone ZM_BFb0046G14 mRNA, complete cds NA coding protein psRNATarget
BT085256.2
ncRNA:22   AGUGCUGUAUACAUCGUGAAUU   1
  *|||||||||||||||||||||
targets:584   ACACGACAUAUGUAGCACUUAA   605

0.0 Zea mays full-length cDNA clone ZM_BFb0345E14 mRNA, complete cds NA coding protein psRNATarget
BT065436.2
ncRNA:22   AGUGCUGUAUACAUCGUGAAUU   1
  *|||||||||||||||||||||
targets:628   ACACGACAUAUGUAGCACUUAA   649

0.0 Zea mays full-length cDNA clone ZM_BFb0155E05 mRNA, complete cds NA coding protein psRNATarget
BT085110.2
ncRNA:22   AGUGCUGUAUACAUCGUGAAUU   1
  *|||||||||||||||||||||
targets:608   ACACGACAUAUGUAGCACUUAA   629

0.0 Zea mays full-length cDNA clone ZM_BFb0291A01 mRNA, complete cds NA coding protein psRNATarget
EZ050138.1
ncRNA:22   AGUGCUGUAUACAUCGUGAAUU   1
  *||||||||=||||||||||||
targets:63   ACACGACAUGUGUAGCACUUAA   84

1.5 TSA: Zea mays contig51256, mRNA sequence NA coding protein psRNATarget
EU943317.1
ncRNA:22   AGUGCUGUAUACAUCGUGAAUU   1
  *||=||||||||||||||||||
targets:1565   ACAUGACAUAUGUAGCACUUAA   1586

1.0 Zea mays clone 1597341 mRNA sequence NA coding protein psRNATarget
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