ncRNA ID | novel_zma_miR14145 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:41727714-41727813 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583942 |
Length | 23 |
Mature sequence(if miRNA) | 78 - UCUUUUUACUAAGACUUGUAAUU - 100 |
Stem-loop(if miRNA) |
--U        U       GUAAUUA     UGUUU   U   -AU    -         CUUUUUAC AAGACUU       UGAUU     GUA GAC   AUAU AUGUCG    |||||||| |||||||       |||||     ||| |||   |||| |||||G    GAGAAGUG UUCUGAA       ACUAA     CAU CUG   UAUA UACAGU UUU        -       ------G     ----U   C   GUU    A      |
Stem-loop sequence | UCUUUUUACUAAGACUUGUAAUUAUGAUUUGUUUGUAUGACAUAUAUAUGUCGGUGACAUAAUAUUUGGUCCUACUAAUCAGAAGUCUUGUGAAGAGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020545178.1 |
|
2.5 | PREDICTED: Zea mays NAD(P)-linked oxidoreductase superfamily protein (LOC100383321), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008661305.2 |
|
2.5 | PREDICTED: Zea mays G patch domain-containing protein TGH homolog (LOC103638373), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008661306.2 |
|
2.5 | PREDICTED: Zea mays G patch domain-containing protein TGH homolog (LOC103638373), transcript variant X2, mRNA | NA | coding protein | psRNATarget |