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BaseInfo

ncRNA ID novel_zma_miR14145
Species Zea mays
Class miRNA
Genome position Chr8:41727714-41727813 [-]
Reference genome RefGen_v4
Source SRR1583942
Length 23
Mature sequence(if miRNA) 78 - UCUUUUUACUAAGACUUGUAAUU - 100
Stem-loop(if miRNA) --U        U       GUAAUUA     UGUUU   U   -AU    -     
   CUUUUUAC AAGACUU       UGAUU     GUA GAC   AUAU AUGUCG
   |||||||| |||||||       |||||     ||| |||   |||| |||||G
   GAGAAGUG UUCUGAA       ACUAA     CAU CUG   UAUA UACAGU
UUU        -       ------G     ----U   C   GUU    A     
Stem-loop sequence UCUUUUUACUAAGACUUGUAAUUAUGAUUUGUUUGUAUGACAUAUAUAUGUCGGUGACAUAAUAUUUGGUCCUACUAAUCAGAAGUCUUGUGAAGAGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545178.1
ncRNA:23   UUAAUGUUCAGAAUCAUUUUUCU   1
  ||--=|||||||||||=||||||
targets:1604   AA--GCAAGUCUUAGUGAAAAGA   1624

2.5 PREDICTED: Zea mays NAD(P)-linked oxidoreductase superfamily protein (LOC100383321), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008661305.2
ncRNA:23   UUAAUGUUCAGAAUCAUUUUUCU   1
  ***||*|||||||||*|||||||
targets:3400   UUGUAGAAGUCUUAGGAAAAAGA   3422

2.5 PREDICTED: Zea mays G patch domain-containing protein TGH homolog (LOC103638373), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008661306.2
ncRNA:23   UUAAUGUUCAGAAUCAUUUUUCU   1
  ***||*|||||||||*|||||||
targets:2944   UUGUAGAAGUCUUAGGAAAAAGA   2966

2.5 PREDICTED: Zea mays G patch domain-containing protein TGH homolog (LOC103638373), transcript variant X2, mRNA NA coding protein psRNATarget