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BaseInfo

ncRNA ID	novel_zma_miR14136
Species	Zea mays
Class	miRNA
Genome position	Chr10:80562489-80562603 [-]
Reference genome	RefGen_v4
Source	SRR2089699
Length	22
Mature sequence(if miRNA)	1 - ACACAUUUAGACACGAACCAAA - 22
Stem-loop(if miRNA)	--UA    A        -CU           UUUUUUAACUUUUUUUUA     C     UA  AA     GUUC GUGUCUAA   UGUCAUAUUUU                  CUAAG UUAGU  UU  A     |||| ||||||||   |||||||||||                  ||||| |||||  ||  U     CAAG CACAGAUU   ACAGUAUAAAA                  GAUUC AAUCA  AG  U AAAC    -        UAC           ----------------UA     A     GC  AC
Stem-loop sequence	UAGUUCAGUGUCUAACUUGUCAUAUUUUUUUUUUAACUUUUUUUUACUAAGCUUAGUUAUUAAAUUCAGACGACUAAACUUAGAUAAAAUAUGACACAUUUAGACACGAACCAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY104775.1	ncRNA:22   AAACCAAGCACAGAUUUACACA   1   |||||||||||*|||||||||| targets:552   UUUGGUUCGUGGCUAAAUGUGU   573 Target Full Sequence	1.5	Zea mays PCO061308 mRNA sequence	NA	coding protein	psRNATarget
XM_008649194.2	ncRNA:22   AAACCAAGCACAGAUUUACACA   1   |||||||||||*|||||||||| targets:1018   UUUGGUUCGUGGCUAAAUGUGU   1039 Target Full Sequence	1.5	PREDICTED: Zea mays D-aminoacyl-tRNA deacylase (AY104775), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT035068.1	ncRNA:22   AAACCAAGCACAGAUUUACACA   1   |||||||||||*|||||||||| targets:1158   UUUGGUUCGUGGCUAAAUGUGU   1179 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0035J23 mRNA, complete cds	NA	coding protein	psRNATarget
BT036147.1	ncRNA:22   AAACCAAGCACAGAUUUACACA   1   |||||||||||*|||||||||| targets:1159   UUUGGUUCGUGGCUAAAUGUGU   1180 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0098I08 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138873.1	ncRNA:22   AAACCAAGCACAGAUUUACACA   1   |||||||||||*|||||||||| targets:1159   UUUGGUUCGUGGCUAAAUGUGU   1180 Target Full Sequence	1.5	Zea mays D-aminoacyl-tRNA deacylase (AY104775), mRNA	NA	coding protein	psRNATarget
BT023987.1	ncRNA:22   AAACCAAGCACAGAUUUACACA   1   |||||||=|||*|||||||||| targets:1502   UUUGGUUUGUGGCUAAAUGUGU   1523 Target Full Sequence	2.5	Zea mays clone EL01N0413F08 mRNA sequence	NA	coding protein	psRNATarget
XM_020538219.1	ncRNA:22   AAACCAAGCACAGAUUUACACA   1   |||||||=|||*|||||||||| targets:2345   UUUGGUUUGUGGCUAAAUGUGU   2366 Target Full Sequence	2.5	PREDICTED: Zea mays Heterogeneous nuclear ribonucleoprotein 1 (LOC100382683), transcript variant X5, mRNA	NA	coding protein	psRNATarget
EU967316.1	ncRNA:22   AAACCAAGCACAGAUUUACACA   1   |||||||||||*|||||||||* targets:487   UUUGGUUCGUGGCUAAAUGUGC   508 Target Full Sequence	2.5	Zea mays clone 301383 diphthamide biosynthesis protein 3 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001177034.1	ncRNA:22   AAACCAAGCACAGAUUUACACA   1   ||||||||||*||||||||||* targets:528   UUUGGUUCGUAUCUAAAUGUGC   549 Target Full Sequence	2.5	Zea mays putative LRR receptor-like serine/threonine-protein kinase (LOC100384510), mRNA	NA	coding protein	psRNATarget
BT083538.1	ncRNA:22   AAACCAAGCACAGAUUUACACA   1   ||||||||||*||||||||||* targets:528   UUUGGUUCGUAUCUAAAUGUGC   549 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0009D08 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008645942.2	ncRNA:22   AAACCAAGCACAGAUUUACACA   1   ||||||||||*||||||||||* targets:3166   UUUGGUUCGUAUCUAAAUGUGC   3187 Target Full Sequence	2.5	PREDICTED: Zea mays putative LRR receptor-like serine/threonine-protein kinase (LOC100384510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI406697.1	ncRNA:19   CCAAGCACAGAUUUACACA   1   |||||||*||||||||||* targets:1   GGUUCGUAUCUAAAUGUGC   19 Target Full Sequence	2.5	Sequence 4822 from Patent EP2074227	NA	coding protein	psRNATarget
JB167158.1	ncRNA:19   CCAAGCACAGAUUUACACA   1   |||||||*||||||||||* targets:1   GGUUCGUAUCUAAAUGUGC   19 Target Full Sequence	2.5	Sequence 4822 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238827.1	ncRNA:19   CCAAGCACAGAUUUACACA   1   |||||||*||||||||||* targets:1   GGUUCGUAUCUAAAUGUGC   19 Target Full Sequence	2.5	Sequence 4822 from Patent EP2985353	NA	coding protein	psRNATarget