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BaseInfo

ncRNA ID	novel_zma_miR14130
Species	Zea mays
Class	miRNA
Genome position	Chr1:270872302-270872380 [+]
Reference genome	RefGen_v4
Source	SRR2089699
Length	24
Mature sequence(if miRNA)	56 - ACAUAGCUCGGCGCCAUAGCCUAU - 79
Stem-loop(if miRNA)	--                G  ACA  G               AGGCUAUGGCGCCGAG UA   UA CUCGGCGCCAUAG   |||||||||||||||| ||   || ||||||||||||C   UCCGAUACCGCGGCUC AU   AU GAGCCGCGGUAUC UA                G  ACA  G
Stem-loop sequence	AGGCUAUGGCGCCGAGGUAACAUAGCUCGGCGCCAUAGCCUAUGGCGCCGAGGUAACAUAGCUCGGCGCCAUAGCCUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020541199.1	ncRNA:24   UAUCCGAUACCGCGGCUCGAUACA   1   ||||*|||||||||||||||=||| targets:1315   AUAGCCUAUGGCGCCGAGCUGUGU   1338 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:24   UAUCCGAUACCGCGGCUCGAUACA   1   ||||*|||||||||||||||=||| targets:1313   AUAGCCUAUGGCGCCGAGCUGUGU   1336 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:24   UAUCCGAUACCGCGGCUCGAUACA   1   ||||*|||||||||||||||=||| targets:1372   AUAGCCUAUGGCGCCGAGCUGUGU   1395 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:24   UAUCCGAUACCGCGGCUCGAUACA   1   ||||*|||||||||||||||=||| targets:1372   AUAGCCUAUGGCGCCGAGCUGUGU   1395 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI405915.1	ncRNA:24   UAUCCGAUACCGCGGCUCGAUACA   1   |*|||||=||||||||||||=||| targets:70   ACAGGCUGUGGCGCCGAGCUGUGU   93 Target Full Sequence	2.5	Sequence 4040 from Patent EP2074227	NA	coding protein	psRNATarget
HI405915.1	ncRNA:24   UAUCCGAUACCGCGGCUCGAUACA   1   ||---||=|||||||||||||*|| targets:13   AU---CUGUGGCGCCGAGCUAGGU   33 Target Full Sequence	2.5	Sequence 4040 from Patent EP2074227	NA	coding protein	psRNATarget
JB166376.1	ncRNA:24   UAUCCGAUACCGCGGCUCGAUACA   1   |*|||||=||||||||||||=||| targets:70   ACAGGCUGUGGCGCCGAGCUGUGU   93 Target Full Sequence	2.5	Sequence 4040 from Patent EP2559767	NA	coding protein	psRNATarget
JB166376.1	ncRNA:24   UAUCCGAUACCGCGGCUCGAUACA   1   ||---||=|||||||||||||*|| targets:13   AU---CUGUGGCGCCGAGCUAGGU   33 Target Full Sequence	2.5	Sequence 4040 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238045.1	ncRNA:24   UAUCCGAUACCGCGGCUCGAUACA   1   |*|||||=||||||||||||=||| targets:70   ACAGGCUGUGGCGCCGAGCUGUGU   93 Target Full Sequence	2.5	Sequence 4040 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238045.1	ncRNA:24   UAUCCGAUACCGCGGCUCGAUACA   1   ||---||=|||||||||||||*|| targets:13   AU---CUGUGGCGCCGAGCUAGGU   33 Target Full Sequence	2.5	Sequence 4040 from Patent EP2985353	NA	coding protein	psRNATarget