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BaseInfo

ncRNA ID	novel_zma_miR14128
Species	Zea mays
Class	miRNA
Genome position	Chr9:156323211-156323327 [+]
Reference genome	RefGen_v4
Source	SRR2089699
Length	24
Mature sequence(if miRNA)	94 - GGGACUGGGGAUGGGAGGACGCGG - 117
Stem-loop(if miRNA)	--     -GG    UU   C     G   -----A   AAGGGGAGACAACGACUCGUGACG   GCGUC   CCGU  CCG GUCCC GCC      GCC                        A   |||||   ||||  ||| ||||| |||      |||   CGCAG   GGUA  GGU CAGGG UGG      CGC                        G GG     GAG    GG   -     G   AGGAGA   GAAGGUGGGGAGCGGUCAGCGAAG
Stem-loop sequence	GCGUCGGCCGUUUCCGCGUCCCGGCCAGCCAAGGGGAGACAACGACUCGUGACGAGGAAGCGACUGGCGAGGGGUGGAAGCGCAGAGGAGGUGGGGACUGGGGAUGGGAGGACGCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU968071.1	ncRNA:24   GGCGCAGGAGGG-UAGGGGUCAGGG   1   ||*|*|||||||-|||||||||||| targets:50   CCUCCUCCUCCCCAUCCCCAGUCCC   74 Target Full Sequence	3.0	Zea mays clone 313771 MARD1 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008674610.2	ncRNA:24   GGCGCAGGAGGG-UAGGGGUCAGGG   1   ||*|*|||||||-|||||||||||| targets:93   CCUCCUCCUCCCCAUCCCCAGUCCC   117 Target Full Sequence	3.0	PREDICTED: Zea mays MARD1 (pco121228), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001154466.2	ncRNA:24   GGCGCAGGAGGG-UAGGGGUCAGGG   1   ||*|*|||||||-|||||||||||| targets:98   CCUCCUCCUCCCCAUCCCCAGUCCC   122 Target Full Sequence	3.0	Zea mays MARD1 (pco121228), mRNA	NA	coding protein	psRNATarget
EU957068.1	ncRNA:24   GGCGCAGGAGGG-UAGGGGUCAGGG   1   ||*|*|||||||-|||||||||||| targets:99   CCUCCUCCUCCCCAUCCCCAGUCCC   123 Target Full Sequence	3.0	Zea mays clone 1581824 MARD1 mRNA, complete cds	NA	coding protein	psRNATarget
KJ726838.1	ncRNA:24   GGCGCAGGAGGGUAGGGGUCAGGG   1   ||*|*||||||||*|||||||||| targets:269   CCUCCUCCUCCCAGCCCCAGUCCC   292 Target Full Sequence	1.5	Zea mays clone pUT3378 G2-like transcription factor (GLK5) mRNA, partial cds	NA	coding protein	psRNATarget
BT035536.2	ncRNA:24   GGCGCAGGAGGGUAGGGGUCAGGG   1   ||*|*||||||||*|||||||||| targets:353   CCUCCUCCUCCCAGCCCCAGUCCC   376 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0068J14 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138445.2	ncRNA:24   GGCGCAGGAGGGUAGGGGUCAGGG   1   ||*|*||||||||*|||||||||| targets:353   CCUCCUCCUCCCAGCCCCAGUCCC   376 Target Full Sequence	1.5	Zea mays putative MYB DNA-binding domain superfamily protein (GLK5), mRNA	NA	coding protein	psRNATarget
XM_020544883.1	ncRNA:24   GGCGCAGGAGGGUAGGGGUCAGGG   1   ||*|*||||||||*|||||||||| targets:398   CCUCCUCCUCCCAGCCCCAGUCCC   421 Target Full Sequence	1.5	PREDICTED: Zea mays putative MYB DNA-binding domain superfamily protein (GLK5), transcript variant X1, mRNA	NA	coding protein	psRNATarget