Search result

BaseInfo

ncRNA ID	novel_zma_miR14126
Species	Zea mays
Class	miRNA
Genome position	Chr9:140120554-140120627 [+]
Reference genome	RefGen_v4
Source	SRR2089699
Length	24
Mature sequence(if miRNA)	1 - ACGGACUGUCCGGCCCAUAGGCGC - 24
Stem-loop(if miRNA)	--A     U         AU    G     U     G    CGGAC GUCCGGCCC  AGGC CGGAC GUCCG A    ||||| |||||||||  |||| ||||| ||||| C    GCCUG CAGGCUGGG  UCCG GCCUG CAGGU C UAC     C         AC    -     C     G
Stem-loop sequence	ACGGACUGUCCGGCCCAUAGGCGCGGACUGUCCGGACCGUGGACCGUCCGGCCUCAGGGUCGGACCGUCCGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU949855.1	ncRNA:24   CGCGGAUACCCGGCCUGUCAGGCA   1   ||||||=||||||||||=|||||| targets:422   GCGCCUGUGGGCCGGACGGUCCGU   445 Target Full Sequence	2.5	Zea mays clone 449025 mRNA sequence	NA	coding protein	psRNATarget
XM_008650408.2	ncRNA:24   CGCGGAUACCCGGCCUGUCAGGCA   1   *||=*|=||||||||||=|||||| targets:1847   ACGUGUGUGGGCCGGACGGUCCGU   1870 Target Full Sequence	2.5	PREDICTED: Zea mays type I inositol polyphosphate 5-phosphatase 8 (LOC103629231), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020540194.1	ncRNA:24   CGCGGAUACCCGGCCUGUCAGGCA   1   *||=*|=||||||||||=|||||| targets:1872   ACGUGUGUGGGCCGGACGGUCCGU   1895 Target Full Sequence	2.5	PREDICTED: Zea mays type I inositol polyphosphate 5-phosphatase 8 (LOC103629231), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ061701.1	ncRNA:24   CGCGGAUACCCGGCCUGUCAGGCA   1   **||||**|||||||||||||||* targets:212   CGGCCUCAGGGCCGGACAGUCCGC   235 Target Full Sequence	3.0	TSA: Zea mays contig62823, mRNA sequence	NA	coding protein	psRNATarget