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BaseInfo

ncRNA ID	novel_zma_miR14122
Species	Zea mays
Class	miRNA
Genome position	Chr9:7215726-7215861 [-]
Reference genome	RefGen_v4
Source	SRR2089699
Length	23
Mature sequence(if miRNA)	114 - CCUCUGCGACGGUGUGGACGGUC - 136
Stem-loop(if miRNA)	--C       A  G       G     CA      GA -           CAAC  GAACACACAAGAGC    CUCUGCG CG UGUGGAC GUCCG  GCUUUG  C CGGACUGUCUG    CU              G    ||||||| || ||||||| |||||  ||||||  | |||||||||||    ||              G    GGGACGC GU GCACCUG CAGGC  CGGGAC  G GCCUGGCGGAC    CG              U GCU       G  A       A     --      AA C           --CA  CUGCGUCCCUUCUG
Stem-loop sequence	CCUCUGCGACGGUGUGGACGGUCCGCAGCUUUGGACCGGACUGUCUGCAACCUGAACACACAAGAGCGGUGUCUUCCCUGCGUCGCACCAGGCGGUCCGCGAACAGGGCCGGACAGUCCACGAUGGCGCAGGGUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU960955.1	ncRNA:23   CUGGCAGGUGUGGCAGCGUCUCC   1   **=||||*||||||||||=|||| targets:238   CUUCGUCGACACCGUCGCGGAGG   260 Target Full Sequence	2.5	Zea mays clone 229850 subtilisin-chymotrypsin inhibitor CI-1B mRNA, complete cds	NA	coding protein	psRNATarget
NM_001245889.1	ncRNA:23   CUGGCAGGUGUGGCAGCGUCUCC   1   **=||||*||||||||||=|||| targets:238   CUUCGUCGACACCGUCGCGGAGG   260 Target Full Sequence	2.5	Zea mays subtilisin-chymotrypsin inhibitor CI-1B (LOC100282452), mRNA	NA	coding protein	psRNATarget
EU954221.1	ncRNA:23   CUGGCAGGUGUGGCAGCGUCUCC   1   **=||||*||||||||||=|||| targets:233   CUUCGUCGACACCGUCGCGGAGG   255 Target Full Sequence	2.5	Zea mays clone 1458758 subtilisin-chymotrypsin inhibitor CI-1B mRNA, complete cds	NA	coding protein	psRNATarget
EU954691.1	ncRNA:23   CUGGCAGGUGUGGCAGCGUCUCC   1   **=||||*||||||||||=|||| targets:240   CUUCGUCGACACCGUCGCGGAGG   262 Target Full Sequence	2.5	Zea mays clone 1476916 subtilisin-chymotrypsin inhibitor CI-1B mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153853.1	ncRNA:23   CUGGCAGGUGUGGCAGCGUCUCC   1   **=||||*||||||||||=|||| targets:240   CUUCGUCGACACCGUCGCGGAGG   262 Target Full Sequence	2.5	Zea mays subtilisin-chymotrypsin inhibitor CI-1B (LOC100280933), mRNA	NA	coding protein	psRNATarget
EU951995.1	ncRNA:23   CUGGCAGGUGUGGCAGCGUCUCC   1   **=||||*||||||||||=|||| targets:236   CUUCGUCGACACCGUCGCGGAGG   258 Target Full Sequence	2.5	Zea mays clone 1064588 subtilisin-chymotrypsin inhibitor CI-1B mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158424.2	ncRNA:23   CUGGCAGGUGUGGCAGCGUCUCC   1   **=||||*||||||||||=|||| targets:238   CUUCGUCGACACCGUCGCGGAGG   260 Target Full Sequence	2.5	Zea mays subtilisin-chymotrypsin inhibitor CI-1B (LOC100285533), mRNA	NA	coding protein	psRNATarget
EU972719.1	ncRNA:23   CUGGCAGGUGUGGCAGCGUCUCC   1   **=||||*||||||||||=|||| targets:262   CUUCGUCGACACCGUCGCGGAGG   284 Target Full Sequence	2.5	Zea mays clone 386631 subtilisin-chymotrypsin inhibitor CI-1B mRNA, complete cds	NA	coding protein	psRNATarget
XM_020538929.1	ncRNA:23   CUGGCAGGUGUGGCAGCGUCUCC   1   **=||||*||||||||||=|||| targets:320   CUUCGUCGACACCGUCGCGGAGG   342 Target Full Sequence	2.5	PREDICTED: Zea mays subtilisin-chymotrypsin inhibitor CI-1B (LOC100280933), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT042548.1	ncRNA:23   CUG--GCAGGUGUGGCAGCGUCUCC   1   *||--||*|||||||*||||||||| targets:208   UACGGCGACCACACCAUCGCAGAGG   232 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0332C09 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148583.1	ncRNA:23   CUG--GCAGGUGUGGCAGCGUCUCC   1   *||--||*|||||||*||||||||| targets:208   UACGGCGACCACACCAUCGCAGAGG   232 Target Full Sequence	2.5	Zea mays uncharacterized LOC100274211 (LOC100274211), mRNA	NA	coding protein	psRNATarget