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BaseInfo

ncRNA ID novel_zma_miR14115
Species Zea mays
Class miRNA
Genome position Chr8:139146285-139146348 [+]
Reference genome RefGen_v4
Source SRR2089699
Length 24
Mature sequence(if miRNA) 41 - UCCGCACCUGUGGGCCGGACGGUC - 64
Stem-loop(if miRNA) --           UG   -C           C
  CUGUCCGGCCU  AGG  CGGACGGUCCG G
  |||||||||||  |||  ||||||||||| G
  GGCAGGCCGGG  UCC  GCCUGUCAGGC U
CU           UG   AC           C
Stem-loop sequence CUGUCCGGCCUUGAGGCCGGACGGUCCGCGGUCCGGACUGUCCGCACCUGUGGGCCGGACGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ059430.1
ncRNA:24   CUGGCAGGCCGGGUGUCCACGCCU   1
  ||||||||||||||||||*|||||
targets:30   GACCGUCCGGCCCACAGGCGCGGA   53

1.5 TSA: Zea mays contig60552, mRNA sequence NA coding protein psRNATarget
EU940813.1
ncRNA:24   CUGGCAGGCCGGGUGUCCACGCCU   1
  ||||||||||||||||||*|||||
targets:43   GACCGUCCGGCCCACAGGCGCGGA   66

1.5 Zea mays clone 1145688 mRNA sequence NA coding protein psRNATarget
BT034345.1
ncRNA:24   CUGGCAGGCCGGGUGUCCACGCCU   1
  |*||||||||||||||||*|||||
targets:734   GUCCGUCCGGCCCACAGGCGCGGA   757

1.5 Zea mays full-length cDNA clone ZM_BFc0009F02 mRNA, complete cds NA coding protein psRNATarget