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BaseInfo

ncRNA ID novel_zma_miR14110
Species Zea mays
Class miRNA
Genome position Chr8:4858257-4858399 [+]
Reference genome RefGen_v4
Source SRR2089699;SRR2089705
Length 24
Mature sequence(if miRNA) 120 - AUGUGAGGAGCUGUAAAAGAUGGU - 143
Stem-loop(if miRNA) --  -         UC         ---   ----C UC   U        U  A     GAAAAA   AUUA    A
  CA CUUUUACAG  CCUUACAUC   CGC     A  UGG GGUUCAUA AA UAGAA      CAA    UUAA G
  || |||||||||  |||||||||   |||     |  ||| |||||||| || |||||      |||    ||||
  GU GAAAAUGUC  GGAGUGUAG   GUG     U  ACC CCAGGUGU UU GUUUU      GUU    AAUU G
UG  A         GA         AUA   AUAAA GA   U        U  A     --AAAC   ---G    C
Stem-loop sequence CACUUUUACAGUCCCUUACAUCCGCCAUCUGGUGGUUCAUAUAAAUAGAAGAAAAACAAAUUAUUAAAGGCUUAAGUUGCAAAUUUUGAUUUUGUGGACCUCCAAGUAAAUAGUGAUAGAUGUGAGGAGCUGUAAAAGAUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008674327.2
ncRNA:24   UGGUAGAAAAUGUCGAGGAGUGUA   1
  *|||*|||||=||||*||||||||
targets:1510   CCCAACUUUUGCAGCCCCUCACAU   1533

2.5 PREDICTED: Zea mays uncharacterized LOC100274883 (LOC100274883), transcript variant X1, mRNA NA coding protein psRNATarget