ncRNA ID | novel_zma_miR14110 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:4858257-4858399 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089699;SRR2089705 |
Length | 24 |
Mature sequence(if miRNA) | 120 - AUGUGAGGAGCUGUAAAAGAUGGU - 143 |
Stem-loop(if miRNA) |
--  -         UC         ---   ----C UC   U        U  A     GAAAAA   AUUA    A   CA CUUUUACAG  CCUUACAUC   CGC     A  UGG GGUUCAUA AA UAGAA      CAA    UUAA G   || |||||||||  |||||||||   |||     |  ||| |||||||| || |||||      |||    ||||   GU GAAAAUGUC  GGAGUGUAG   GUG     U  ACC CCAGGUGU UU GUUUU      GUU    AAUU G UG  A         GA         AUA   AUAAA GA   U        U  A     --AAAC   ---G    C |
Stem-loop sequence | CACUUUUACAGUCCCUUACAUCCGCCAUCUGGUGGUUCAUAUAAAUAGAAGAAAAACAAAUUAUUAAAGGCUUAAGUUGCAAAUUUUGAUUUUGUGGACCUCCAAGUAAAUAGUGAUAGAUGUGAGGAGCUGUAAAAGAUGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008674327.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC100274883 (LOC100274883), transcript variant X1, mRNA | NA | coding protein | psRNATarget |