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BaseInfo

ncRNA ID novel_zma_miR14106
Species Zea mays
Class miRNA
Genome position Chr8:82438252-82438367 [-]
Reference genome RefGen_v4
Source SRR2089699
Length 24
Mature sequence(if miRNA) 93 - GCACUGGACUGUUCGGUGAGCCAA - 116
Stem-loop(if miRNA) --         U     GU     AAUG    -  -----    --CA   -    G    CA
  GCACUGGAC GUUCG  GAGCC    GCUG CC     AGCG    ACG GUCG UCGC  A
  ||||||||| |||||  |||||    |||| ||     ||||    ||| |||| ||||  A
  UGUGGCCUG CAGGC  UUCGG    CGGC GG     UCGC    UGC CAGC AGCG  U
CG         U     --     AGGA    U  CAACC    UCGG   G    G    CC
Stem-loop sequence GCACUGGACUGUUCGGUGAGCCAAUGGCUGCCAGCGCAACGGUCGGUCGCCAAAUCCGCGAGCGACGCGUGGCUCGCUCCAACGGUCGGCAGGAGGCUUCGGACUGUCCGGUGUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT086229.2
ncRNA:24   AACCGAGUGGCUUGUCAGGUCACG   1
  **|*|||||||||||||||=|||*
targets:748   AAGACUCACCGAACAGUCCGGUGA   771

2.5 Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds NA coding protein psRNATarget