ncRNA ID | novel_zma_miR14099 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:139351563-139351706 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089699;SRR2089702 |
Length | 22 |
Mature sequence(if miRNA) | 123 - AUCGAGCGUAGAGACAUGGUGU - 144 |
Stem-loop(if miRNA) |
--U    U CU     U       UC     UACC   UC   --C    C   UC UGCU    ---   C    -  UC    CCGU G  UCUAC UUCGGUC  GCUUC    AGU  CAC   GCCA CAG  G    GCCC   UCG UCGU GU  U    |||| |  ||||| |||||||  |||||    |||  |||   |||| |||  |    ||||   ||| |||| ||    GGUA C  AGAUG GAGCUAG  UGAAG    UCA  GUG   CGGU GUC  C    CGGG   AGC AGCG CG  U UGU    - AG     C       --     ---C   -C   CCA    C   CU ----    UCC   -    U  UG |
Stem-loop sequence | UCCGUUGCUUCUACUUUCGGUCUCGCUUCUACCAGUUCCACCGCCACCAGUCGUGCUGCCCUCGCUCGUGUUCUUGUGCUGCGACGACCUGGGCCUCCUGCUGGCACCGUGCACUCGAAGUGAUCGAGCGUAGAGACAUGGUGU |