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BaseInfo

ncRNA ID	novel_zma_miR14097
Species	Zea mays
Class	miRNA
Genome position	Chr7:169479346-169479546 [+]
Reference genome	RefGen_v4
Source	SRR1583942
Length	21
Mature sequence(if miRNA)	1 - UGAUAUCAUAUGUACAGACUG - 21
Stem-loop(if miRNA)	--                 AC           A  GAAAAA    C  U   ACUA   C            C            --UC     U    - U   UGAUAUCAUAUGUACAG  UGUGAUAAAAA UU      GUUU GA AAA    UGA GCGCUAUGUGUA AAACCUAAGAGA    CACAU GAAA C C   |||||||||||||||||  ||||||||||| ||      |||| || |||    ||| |||||||||||| ||||||||||||    ||||| |||| | U   ACUAUAGUAUACAUGUC  ACACUAUUUUU AA      CAAA CU UUU    ACU UGUGAUACACAU UUUGGAUUCUCU    GUGUA CUUU G A GU                 CA           A  AUCUUA    C  C   CAAC   C            C            UGAU     -    A U
Stem-loop sequence	UGAUAUCAUAUGUACAGACUGUGAUAAAAAAUUGAAAAAGUUUCGAUAAAACUAUGACGCGCUAUGUGUACAAACCUAAGAGAUCCACAUUGAAACUCUAUGAUUUCAUGUGUAGUUCUCUUAGGUUUCUACACAUAGUGUCUCACAACUUUCUCCAAACAUUCUAAAAUUUUUAUCACAACCUGUACAUAUGAUAUCAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163670.1	ncRNA:21   GUCAGACAUGUAUACUAUAGU   1   |||*||*|||||||||||||| targets:206   CAGCCUCUACAUAUGAUAUCA   226 Target Full Sequence	2.0	Sequence 1334 from Patent EP2559767	NA	coding protein	psRNATarget
HI403209.1	ncRNA:21   GUCAGACAUGUAUACUAUAGU   1   |||*||*|||||||||||||| targets:206   CAGCCUCUACAUAUGAUAUCA   226 Target Full Sequence	2.0	Sequence 1334 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235339.1	ncRNA:21   GUCAGACAUGUAUACUAUAGU   1   |||*||*|||||||||||||| targets:206   CAGCCUCUACAUAUGAUAUCA   226 Target Full Sequence	2.0	Sequence 1334 from Patent EP2985353	NA	coding protein	psRNATarget
JB163681.1	ncRNA:21   GUCAGACAUGUAUACUAUAGU   1   ||**||||||||||||||||| targets:200   CAACCUGUACAUAUGAUAUCA   220 Target Full Sequence	2.0	Sequence 1345 from Patent EP2559767	NA	coding protein	psRNATarget
HI403220.1	ncRNA:21   GUCAGACAUGUAUACUAUAGU   1   ||**||||||||||||||||| targets:200   CAACCUGUACAUAUGAUAUCA   220 Target Full Sequence	2.0	Sequence 1345 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235350.1	ncRNA:21   GUCAGACAUGUAUACUAUAGU   1   ||**||||||||||||||||| targets:200   CAACCUGUACAUAUGAUAUCA   220 Target Full Sequence	2.0	Sequence 1345 from Patent EP2985353	NA	coding protein	psRNATarget
EZ089840.1	ncRNA:21   GUCAGACAUGUAUACUAUAGU   1   |||*||*|||||||||||||| targets:2   CAGCCUCUACAUAUGAUAUCA   22 Target Full Sequence	2.0	TSA: Zea mays contig25486, mRNA sequence	NA	coding protein	psRNATarget
XM_020546111.1	ncRNA:21   GUCAGACAUGUAUACUAUAGU   1   =||||**|||||||||||||| targets:4025   UAGUCGCUACAUAUGAUAUCA   4045 Target Full Sequence	2.0	PREDICTED: Zea mays receptor-like protein 12 (LOC103642583), mRNA	NA	coding protein	psRNATarget