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BaseInfo

ncRNA ID	novel_zma_miR14095
Species	Zea mays
Class	miRNA
Genome position	Chr7:33215340-33215407 [+]
Reference genome	RefGen_v4
Source	SRR2089699;SRR2089701;SRR2089703
Length	24
Mature sequence(if miRNA)	1 - GGGAGGAUUGGAGGGGAUAGAGGG - 24
Stem-loop(if miRNA)	--   A              A          CUA   GGG GGAUUGGAGGGGAU GAGGGGGAAA   G   ||| |||||||||||||| ||||||||||   CCC CCUAACCUCCCCUA CUCCCCCUUU   U UA   C              A          ACU
Stem-loop sequence	GGGAGGAUUGGAGGGGAUAGAGGGGGAAACUAGUUCAUUUCCCCCUCAAUCCCCUCCAAUCCCCCCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163954.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   |||||*|||||||||||||||||| targets:35   CCCUCAAUCCCCUCCAAUCCUCCC   58 Target Full Sequence	1.0	Sequence 1618 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235623.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   |||||*|||||||||||||||||| targets:35   CCCUCAAUCCCCUCCAAUCCUCCC   58 Target Full Sequence	1.0	Sequence 1618 from Patent EP2985353	NA	coding protein	psRNATarget
HI403493.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   |||||*|||||||||||||||||| targets:35   CCCUCAAUCCCCUCCAAUCCUCCC   58 Target Full Sequence	1.0	Sequence 1618 from Patent EP2074227	NA	coding protein	psRNATarget
BT088155.1	ncRNA:24   GGGAGA--UAGGGGAGGUUAGGAGGG   1   |=||||--|||||||||||||||||| targets:1464   CUCUCUCAAUCCCCUCCAAUCCUCCC   1489 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0038D09 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020551688.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   |||||*|||||||||=|||||||| targets:2153   CCCUCAAUCCCCUCCGAUCCUCCC   2176 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100383632), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ235485.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   =||||*|||||||||||||||=|| targets:33   UCCUCAAUCCCCUCCAAUCCUUCC   56 Target Full Sequence	2.5	Sequence 1480 from Patent EP2985353	NA	coding protein	psRNATarget
JB163816.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   =||||*|||||||||||||||=|| targets:33   UCCUCAAUCCCCUCCAAUCCUUCC   56 Target Full Sequence	2.5	Sequence 1480 from Patent EP2559767	NA	coding protein	psRNATarget
HI403355.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   =||||*|||||||||||||||=|| targets:33   UCCUCAAUCCCCUCCAAUCCUUCC   56 Target Full Sequence	2.5	Sequence 1480 from Patent EP2074227	NA	coding protein	psRNATarget
HI409663.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ||||=*|||||||=|||||||||| targets:70   CCCUUAAUCCCCUUCAAUCCUCCC   93 Target Full Sequence	2.5	Sequence 7788 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241793.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ||||=*|||||||=|||||||||| targets:70   CCCUUAAUCCCCUUCAAUCCUCCC   93 Target Full Sequence	2.5	Sequence 7788 from Patent EP2985353	NA	coding protein	psRNATarget
JB170124.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ||||=*|||||||=|||||||||| targets:70   CCCUUAAUCCCCUUCAAUCCUCCC   93 Target Full Sequence	2.5	Sequence 7788 from Patent EP2559767	NA	coding protein	psRNATarget
EZ098881.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ||||=*||||||||||||||||=| targets:80   CCCUUAAUCCCCUCCAAUCCUCUC   103 Target Full Sequence	2.5	TSA: Zea mays contig34536, mRNA sequence	NA	coding protein	psRNATarget
EU961132.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ||||=*|||||||=|||||||||| targets:824   CCCUUAAUCCCCUUCAAUCCUCCC   847 Target Full Sequence	2.5	Zea mays clone 232865 phospholipid hydroperoxide glutathione peroxidase mRNA, complete cds	NA	coding protein	psRNATarget
BT040716.2	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ||||=*|||||||=|||||||||| targets:863   CCCUUAAUCCCCUUCAAUCCUCCC   886 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0120F10 mRNA, complete cds	NA	coding protein	psRNATarget
BT066291.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ||||=*|||||||=|||||||||| targets:868   CCCUUAAUCCCCUUCAAUCCUCCC   891 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0176M03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147738.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ||||=*|||||||=|||||||||| targets:868   CCCUUAAUCCCCUUCAAUCCUCCC   891 Target Full Sequence	2.5	Zea mays putative glutathione peroxidase (LOC100273297), mRNA	NA	coding protein	psRNATarget
EZ055746.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   *||||*|||||||||||||||||* targets:78   ACCUCAAUCCCCUCCAAUCCUCCA   101 Target Full Sequence	2.0	TSA: Zea mays contig56868, mRNA sequence	NA	coding protein	psRNATarget
AY110351.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   *||||*|||||||||||||||||* targets:44   ACCUCAAUCCCCUCCAAUCCUCCA   67 Target Full Sequence	2.0	Zea mays CL33021_1 mRNA sequence	NA	coding protein	psRNATarget
LQ235557.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ***||*|||||=|||||||||||| targets:34   GGAUCAAUCCCUUCCAAUCCUCCC   57 Target Full Sequence	2.5	Sequence 1552 from Patent EP2985353	NA	coding protein	psRNATarget
HI403427.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ***||*|||||=|||||||||||| targets:34   GGAUCAAUCCCUUCCAAUCCUCCC   57 Target Full Sequence	2.5	Sequence 1552 from Patent EP2074227	NA	coding protein	psRNATarget
JB163888.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ***||*|||||=|||||||||||| targets:34   GGAUCAAUCCCUUCCAAUCCUCCC   57 Target Full Sequence	2.5	Sequence 1552 from Patent EP2559767	NA	coding protein	psRNATarget
HI403300.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ***||*|||||=|||||||||||| targets:34   GGAUCAAUCCCUUCCAAUCCUCCC   57 Target Full Sequence	2.5	Sequence 1425 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235430.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ***||*|||||=|||||||||||| targets:34   GGAUCAAUCCCUUCCAAUCCUCCC   57 Target Full Sequence	2.5	Sequence 1425 from Patent EP2985353	NA	coding protein	psRNATarget
JB163761.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   ***||*|||||=|||||||||||| targets:34   GGAUCAAUCCCUUCCAAUCCUCCC   57 Target Full Sequence	2.5	Sequence 1425 from Patent EP2559767	NA	coding protein	psRNATarget
EU950017.1	ncRNA:24   GGGAGAUAGGGGAGGUUAGGAGGG   1   *==|*||||=|||||=|||||||| targets:485   AUUUAUAUCUCCUCCGAUCCUCCC   508 Target Full Sequence	2.5	Zea mays clone 457681 mRNA sequence	NA	coding protein	psRNATarget