Search result

BaseInfo

ncRNA ID	novel_zma_miR14082
Species	Zea mays
Class	miRNA
Genome position	Chr6:100566322-100566428 [+]
Reference genome	RefGen_v4
Source	SRR2089699;SRR2089703;SRR2089704
Length	24
Mature sequence(if miRNA)	84 - AUAAUUUUGAAUAAGGAGGGGAUU - 107
Stem-loop(if miRNA)	--                             CUA    AGG    ACAA    G   UCUCCUCCUUAUUCAAAAUUAUAUAAGGA   GUUU   AGCC    AACC G   |||||||||||||||||||||||||||||   ||||   ||||    |||| A   AGGGGAGGAAUAAGUUUUAAUAUAUUCCU   UAAA   UCGG    UUGG G UU                             CUC    --A    GAAA    G
Stem-loop sequence	UCUCCUCCUUAUUCAAAAUUAUAUAAGGACUAGUUUAGGAGCCACAAAACCGGAGGGGUUAAAGGGCUAAAAUCUCUCCUUAUAUAAUUUUGAAUAAGGAGGGGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552918.1	ncRNA:24   UUAGGGGAGGAAUAAGUUUUAAUA   1   |||||||||||||||||||*|||* targets:2200   AAUCCCCUCCUUAUUCAAAUUUAA   2223 Target Full Sequence	2.5	PREDICTED: Zea mays negative regulator of systemic acquired resistance SNI1 (LOC103654875), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020552919.1	ncRNA:24   UUAGGGGAGGAAUAAGUUUUAAUA   1   |||||||||||||||||||*|||* targets:1547   AAUCCCCUCCUUAUUCAAAUUUAA   1570 Target Full Sequence	2.5	PREDICTED: Zea mays negative regulator of systemic acquired resistance SNI1 (LOC103654875), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008676338.2	ncRNA:24   UUAGGGGAGGAAUAAGUUUUAAUA   1   |||=|=|||=|||||||||||||* targets:1730   AAUUCUCUCUUUAUUCAAAAUUAA   1753 Target Full Sequence	3.0	PREDICTED: Zea mays probable inactive purple acid phosphatase 16 (LOC103650765), mRNA	NA	coding protein	psRNATarget