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BaseInfo

ncRNA ID	novel_zma_miR14076
Species	Zea mays
Class	miRNA
Genome position	Chr5:72082660-72082777 [+]
Reference genome	RefGen_v4
Source	SRR2089699
Length	24
Mature sequence(if miRNA)	95 - ACCAAUCCAGCAGAAACGAACAAG - 118
Stem-loop(if miRNA)	--         G   C      --UACC      C     ACC     --AAA    --A  U   UGUUCGUUU UGU GGAUUG      CGGAAU GUUCC   UAAUC     GUUU   UA A   ||||||||| ||| ||||||      |||||| |||||   |||||     ||||   || A   ACAAGCAAA ACG CCUAAC      GCCUUG CAAGG   AUUGG     CGAA   AU A GA         G   A      CACCUA      C     ---     CCUAA    GAG  U
Stem-loop sequence	UGUUCGUUUGUGUCGGAUUGUACCCGGAAUCGUUCCACCUAAUCAAAGUUUAUAUAAAUUAGAGAAGCAAUCCGGUUAGGAACCGUUCCGAUCCACCAAUCCAGCAGAAACGAACAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU949492.1	ncRNA:24   GAA-CAAGCAAAGACGACCUAACCA   1   |||-||||||||||||||||||||| targets:248   CUUAGUUCGUUUCUGCUGGAUUGGU   272 Target Full Sequence	0.0	Zea mays clone 420421 mRNA sequence	NA	coding protein	psRNATarget
EU953449.1	ncRNA:24   GAA-CAAGCAAAGACGACCUAACCA   1   |||-||||||||||||||||||||| targets:2513   CUUAGUUCGUUUCUGCUGGAUUGGU   2537 Target Full Sequence	0.0	Zea mays clone 1412735 ATP-binding cassette sub-family G member 2 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153653.1	ncRNA:24   GAA-CAAGCAAAGACGACCUAACCA   1   |||-||||||||||||||||||||| targets:2513   CUUAGUUCGUUUCUGCUGGAUUGGU   2537 Target Full Sequence	0.0	Zea mays ATP-binding cassette sub-family G member 2 (LOC100280733), mRNA	NA	coding protein	psRNATarget
BT017859.1	ncRNA:24   GAACAAGCAAAGACGACCUAACCA   1   |||||||||||||||*|||||||| targets:937   CUUGUUCGUUUCUGCCGGAUUGGU   960 Target Full Sequence	1.5	Zea mays clone EL01N0511E01.c mRNA sequence	NA	coding protein	psRNATarget
XM_020551571.1	ncRNA:24   GAACAAGCAAAGACGACCUAACCA   1   |||||||||||||||*|||||||| targets:1226   CUUGUUCGUUUCUGCCGGAUUGGU   1249 Target Full Sequence	1.5	PREDICTED: Zea mays protein recA (LOC100282426), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT062375.1	ncRNA:24   GAACAAGCAAAGACGACCUAACCA   1   |||||||||||||||*|||||||| targets:1518   CUUGUUCGUUUCUGCCGGAUUGGU   1541 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0287P21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001352179.1	ncRNA:24   GAACAAGCAAAGACGACCUAACCA   1   |||||||||||||||*|||||||| targets:1517   CUUGUUCGUUUCUGCCGGAUUGGU   1540 Target Full Sequence	1.5	Zea mays protein recA (LOC100282426), mRNA	NA	coding protein	psRNATarget
BT085007.1	ncRNA:24   GAACAAGCAAAGACGACCUAACCA   1   |||||||||||||||*|||||||| targets:1517   CUUGUUCGUUUCUGCCGGAUUGGU   1540 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0224O05 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008678176.2	ncRNA:24   GAACAAGCAAAGACGACCUAACCA   1   |||||||||||||||*|||||||| targets:1541   CUUGUUCGUUUCUGCCGGAUUGGU   1564 Target Full Sequence	1.5	PREDICTED: Zea mays protein recA (LOC100282426), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT068101.1	ncRNA:24   GAACAAGCAAAGACGACCUAACCA   1   ||*||||||||||||||||||||| targets:2072   CUGGUUCGUUUCUGCUGGAUUGGU   2095 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0040E04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176352.1	ncRNA:24   GAACAAGCAAAGACGACCUAACCA   1   ||*||||||||||||||||||||| targets:2072   CUGGUUCGUUUCUGCUGGAUUGGU   2095 Target Full Sequence	0.0	Zea mays uncharacterized LOC100383715 (LOC100383715), mRNA	NA	coding protein	psRNATarget
XM_008649755.2	ncRNA:24   GAACAAGCAAAGACGACCUAACCA   1   |||||||||||||||*|||||||| targets:898   CUUGUUCGUUUCUGCCGGAUUGGU   921 Target Full Sequence	1.5	PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (cl16339_1), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020539029.1	ncRNA:24   GAACAAGCAAAGACGACCUAACCA   1   |||||||||||||||*|||||||| targets:1015   CUUGUUCGUUUCUGCCGGAUUGGU   1038 Target Full Sequence	1.5	PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (cl16339_1), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020542824.1	ncRNA:24   GAACAAGCAAAGACGACCUAACCA   1   |**|||||||||||||||||||** targets:3941   CCCGUUCGUUUCUGCUGGAUUGCA   3964 Target Full Sequence	2.5	PREDICTED: Zea mays leucine-rich repeat receptor protein kinase MSP1-like (LOC103637482), mRNA	NA	coding protein	psRNATarget