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BaseInfo

ncRNA ID novel_zma_miR14050
Species Zea mays
Class miRNA
Genome position Chr7:119425199-119425401 [+]
Reference genome RefGen_v4
Source SRR1583942
Length 24
Mature sequence(if miRNA) 180 - AUCUCUCCAAUUAUCUUGUCACCA - 203
Stem-loop(if miRNA) --        GG     U    G      A  U      AUCCCUUGCUA      -  -       -   C                      GCC   A   G
  GUGACAAG  AAUUG AGAG AUCUAU GG GAGGAA           UUCCUC CC AUGGAUC UCU CAAUUCUCUUGUCACCAAAUCA   CUU AGA C
  ||||||||  ||||| |||| |||||| || ||||||           |||||| || ||||||| ||| ||||||||||||||||||||||   ||| |||
  CACUGUUC  UUAAC UCUC UAGGUA CC CUCCUU           AAGGAG GG UAUCUAG AGA GUUAAGGGAACAGUGGUUUGGU   GAG UUU C
AC        UA     C    -      C  -      AUCGUUCCCUA      U  A       G   U                      --A   A   G
Stem-loop sequence GUGACAAGGGAAUUGUAGAGGAUCUAUAGGUGAGGAAAUCCCUUGCUAUUCCUCCCAUGGAUCUCUCCAAUUCUCUUGUCACCAAAUCAGCCCUUAAGAGCCGUUUAGAGAUGGUUUGGUGACAAGGGAAUUGUAGAGGAUCUAUAGGUGAGGAAAUCCCUUGCUAUUCCUCCCCAUGGAUCUCUCCAAUUAUCUUGUCACCA