Search result

BaseInfo

ncRNA ID	novel_zma_miR14046
Species	Zea mays
Class	miRNA
Genome position	Chr4:32714112-32714161 [-]
Reference genome	RefGen_v4
Source	SRR2089699
Length	24
Mature sequence(if miRNA)	1 - AUCGGACUGUCCGGUGCCCACACG - 24
Stem-loop(if miRNA)	----   A         U    U        UGG GCACCGGAC GUCC GUGG     ||| ||||||||| |||| |||C     ACC CGUGGCCUG CAGG UAUA GCAC   -         U    C
Stem-loop sequence	UGGAGCACCGGACUGUCCUGUGGCAUAUCGGACUGUCCGGUGCCCACACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU950973.1	ncRNA:24   GCACACCCGUGGCCUGUCAGGCUA   1   ||-|||*|||||||||||||||=| targets:182   CG-GUGUGCACCGGACAGUCCGGU   204 Target Full Sequence	2.5	Zea mays clone 677173 mRNA sequence	NA	coding protein	psRNATarget
EZ108756.1	ncRNA:24   GC-ACACCCGUGGCCUGUCAGGCUA   1   ||-||*|*|||||||||||||||=| targets:143   CGAUGGGCGCACCGGACAGUCCGGU   167 Target Full Sequence	2.5	TSA: Zea mays contig44415, mRNA sequence	NA	coding protein	psRNATarget
BT061709.2	ncRNA:24   GC-ACACCCGUGGCCUGUCAGGCUA   1   ||-||*|*|||||||||||||||=| targets:586   CGAUGGGUGCACCGGACAGUCCGGU   610 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0176K17 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174416.1	ncRNA:24   GC-ACACCCGUGGCCUGUCAGGCUA   1   ||-||*|*|||||||||||||||=| targets:586   CGAUGGGUGCACCGGACAGUCCGGU   610 Target Full Sequence	2.5	Zea mays uncharacterized LOC100381596 (LOC100381596), mRNA	NA	coding protein	psRNATarget