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BaseInfo

ncRNA ID	novel_zma_miR14025
Species	Zea mays
Class	miRNA
Genome position	Chr3:176559722-176559943 [-]
Reference genome	RefGen_v4
Source	SRR2089698
Length	23
Mature sequence(if miRNA)	1 - CCAGAUGGGUUGGCGCAAGACGG - 23
Stem-loop(if miRNA)	G    --                                                  C           C     A     A     -----A   CG UC     --U    U  UGUC  GCGCCGACCCAUCUGGGCUGGGACACGCAGCGACAAUUUACUCGUCGGUC AGGGACCCCCC GGGUC AAACG CGACA      UAC  G  CAUGA   AGGU C  ||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||      |||  |  |||||   |||| A  GCAG  CGCGGUUGGGUAGACCCGACCCUGUGCGUCGCUGUUAAAUGAGCAGCCAG UCCCUGGGGGG CCCAG UUUGU GCUGU      AUG  C  GUAUU   UUCG U G    AA                                                  A           C     C     G     GACCAG   AU GU     UAU    U
Stem-loop sequence	GUGUCGCGCCGACCCAUCUGGGCUGGGACACGCAGCGACAAUUUACUCGUCGGUCCAGGGACCCCCCCGGGUCAAAACGACGACAAUACCGGUCCAUGAUAGGUUCAUUGCUUUAUUUAUGUGCUAGUAGACCAGUGUCGGUGUUUCGACCCCGGGGGGUCCCUAGACCGACGAGUAAAUUGUCGCUGCGUGUCCCAGCCCAGAUGGGUUGGCGCAAGACGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU940899.1	ncRNA:23   GGCAGAACGCGGUUGGGUAGACC   1   ||||||||||||=|||||||||| targets:1893   CCGUCUUGCGCCGACCCAUCUGG   1915 Target Full Sequence	1.5	Zea mays clone 1168123 mRNA sequence	NA	coding protein	psRNATarget
XM_020541624.1	ncRNA:23   GGCAGAACGCGGUUGGGUAGACC   1   ||||||||||||=|||||||||| targets:1887   CCGUCUUGCGCCGACCCAUCUGG   1909 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103644648 (LOC103644648), mRNA	NA	coding protein	psRNATarget
BT017984.1	ncRNA:23   GGCAGAACGCGGUUGGGUAGACC   1   ||||||*|||||=|||||||||| targets:298   CCGUCUCGCGCCGACCCAUCUGG   320 Target Full Sequence	2.5	Zea mays clone EL01N0525E01.c mRNA sequence	NA	coding protein	psRNATarget
XM_020541001.1	ncRNA:23   GGCAGAACGCGGUUGGGUAGACC   1   ||||||*|||||=|||||||||| targets:6076   CCGUCUCGCGCCGACCCAUCUGG   6098 Target Full Sequence	2.5	PREDICTED: Zea mays plasma membrane ATPase 2-like (LOC103632998), transcript variant X36, mRNA	NA	coding protein	psRNATarget
XM_008654039.1	ncRNA:23   GGCAGAACGCGGUUGGGUAGACC   1   ||*|||*|||||=|||||||||| targets:1190   CCAUCUCGCGCCGACCCAUCUGG   1212 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103632220 (LOC103632220), mRNA	NA	coding protein	psRNATarget
BT018612.1	ncRNA:23   GGCAGAACGCGGUUGGGUAGACC   1   |*|*||*|||||=|||||||||| targets:295   CGGCCUCGCGCCGACCCAUCUGG   317 Target Full Sequence	2.5	Zea mays clone EL01N0501C03.d mRNA sequence	NA	coding protein	psRNATarget