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BaseInfo

ncRNA ID	novel_zma_miR14010
Species	Zea mays
Class	miRNA
Genome position	Chr2:28081756-28081888 [-]
Reference genome	RefGen_v4
Source	SRR2089698
Length	22
Mature sequence(if miRNA)	1 - UCUUAUCGUUUAGUCCUUAUCU - 22
Stem-loop(if miRNA)	--    A          CG    AAA         C    UUAAA    CG   AAGAA     UACU   AUGA GACUAAACGA  AGAC   UUUAUUAAG CUAA     UCCA  AUU     AUGUG    U   |||| ||||||||||  ||||   ||||||||| ||||     ||||  |||     |||||    U   UAUU CUGAUUUGCU  UCUG   AGAUAAUUC GAUU     GGGU  UAA     UACAC    A UC    C          AU    CUC         A    ----C    AA   GCGAG     CACG
Stem-loop sequence	AUGAAGACUAAACGACGAGACAAAUUUAUUAAGCCUAAUUAAAUCCACGAUUAAGAAAUGUGUACUUUAGCACCACAUGAGCGAAUAAUGGGCUUAGACUUAAUAGACUCGUCUUAUCGUUUAGUCCUUAUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238510.1	ncRNA:22   UCUAUUCCUGAUUUGCUAUUCU   1   ||||=||||||||||||||||| targets:16   AGAUGAGGACUAAACGAUAAGA   37 Target Full Sequence	1.0	Sequence 4505 from Patent EP2985353	NA	coding protein	psRNATarget
HI406380.1	ncRNA:22   UCUAUUCCUGAUUUGCUAUUCU   1   ||||=||||||||||||||||| targets:16   AGAUGAGGACUAAACGAUAAGA   37 Target Full Sequence	1.0	Sequence 4505 from Patent EP2074227	NA	coding protein	psRNATarget
JB166841.1	ncRNA:22   UCUAUUCCUGAUUUGCUAUUCU   1   ||||=||||||||||||||||| targets:16   AGAUGAGGACUAAACGAUAAGA   37 Target Full Sequence	1.0	Sequence 4505 from Patent EP2559767	NA	coding protein	psRNATarget
EZ109360.1	ncRNA:22   UCUAUUCCUGAUUUGCUAUUCU   1   |||||||||||||||*|||||| targets:124   AGAUAAGGACUAAACAAUAAGA   145 Target Full Sequence	1.5	TSA: Zea mays contig45019, mRNA sequence	NA	coding protein	psRNATarget
BT038892.1	ncRNA:22   UCUAUUCCUGAUUUGCUAUUCU   1   ||||*||||||||||||||||| targets:1503   AGAUUAGGACUAAACGAUAAGA   1524 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0338H03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001146995.2	ncRNA:22   UCUAUUCCUGAUUUGCUAUUCU   1   ||||*||||||||||||||||| targets:1522   AGAUUAGGACUAAACGAUAAGA   1543 Target Full Sequence	1.0	Zea mays Class I glutamine amidotransferase-like superfamily protein (LOC100272526), mRNA	NA	coding protein	psRNATarget
BT070213.1	ncRNA:22   UCUAUUCCUGAUUUGCUAUUCU   1   |||*||||||||||||=||||| targets:458   AGACAAGGACUAAACGGUAAGA   479 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0173I09 mRNA, complete cds	NA	coding protein	psRNATarget
EU971572.1	ncRNA:22   UCUAUUCCUGAUUUGCUAUUCU   1   |||*||||||||||||=||||| targets:472   AGACAAGGACUAAACGGUAAGA   493 Target Full Sequence	2.5	Zea mays clone 367409 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU952618.1	ncRNA:22   UCUAUUCCUGAUUUGCUAUUCU   1   *|=||*|||*|||||||||||| targets:685   UGGUAUGGAAUAAACGAUAAGA   706 Target Full Sequence	2.5	Zea mays clone 1284458 mRNA sequence	NA	coding protein	psRNATarget