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BaseInfo

ncRNA ID novel_zma_miR14004
Species Zea mays
Class miRNA
Genome position Chr2:200513080-200513146 [-]
Reference genome RefGen_v4
Source SRR2089698;SRR2089703
Length 24
Mature sequence(if miRNA) 1 - ACUGUUUUUACACUUUAGGCUGGC - 24
Stem-loop(if miRNA) --          ----      CAAC         GG
  CGGCCUAAAG    AAGGCA    GUGGUUUAG  C
  ||||||||||    ||||||    |||||||||  C
  GUCGGAUUUC    UUUUGU    CACCGAGUC  G
CG          ACAU      ----         GG
Stem-loop sequence CGGCCUAAAGAAGGCACAACGUGGUUUAGGGCCGGGCUGAGCCACUGUUUUUACACUUUAGGCUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545034.1
ncRNA:24   CGGUCGGAUUUCACAUUUUUGUCA   1
  |||||||*=|||||||||||||||
targets:2897   GCCAGCCCGAAGUGUAAAAACAGU   2920

2.0 PREDICTED: Zea mays aconitase 2 (aco2), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020545035.1
ncRNA:24   CGGUCGGAUUUCACAUUUUUGUCA   1
  |||||||*=|||||||||||||||
targets:3214   GCCAGCCCGAAGUGUAAAAACAGU   3237

2.0 PREDICTED: Zea mays aconitase 2 (aco2), transcript variant X3, mRNA NA coding protein psRNATarget