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BaseInfo

ncRNA ID novel_zma_miR14003
Species Zea mays
Class miRNA
Genome position Chr10:53876631-53876711 [-]
Reference genome RefGen_v4
Source SRR2089698;SRR2089701
Length 24
Mature sequence(if miRNA) 58 - AGAAGCCGCCGAAAAUAGACCAUU - 81
Stem-loop(if miRNA) --                  A            A      
  AGAAGCCGCCGAAAAUAG CCAUUUGCCGCC AAAAUAG
  |||||||||||||||||| |||||||||||| ||||||C
  UCUUCGGUGGCUUUUAUC GGUAAACGGUGG UUUUAUC
GG                  C            C      
Stem-loop sequence AGAAGCCGCCGAAAAUAGACCAUUUGCCGCCAAAAAUAGCCUAUUUUCGGUGGCAAAUGGCCUAUUUUCGGUGGCUUCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ239334.1
ncRNA:24   UUACCAGAUAAAAGCCGCCGAAGA   1
  ***||*=|||||||||||||||||
targets:60   UUAGGCUUAUUUUCGGCGGCUUCU   83

2.0 Sequence 5329 from Patent EP2985353 NA coding protein psRNATarget
HI407204.1
ncRNA:24   UUACCAGAUAAAAGCCGCCGAAGA   1
  ***||*=|||||||||||||||||
targets:60   UUAGGCUUAUUUUCGGCGGCUUCU   83

2.0 Sequence 5329 from Patent EP2074227 NA coding protein psRNATarget
JB167665.1
ncRNA:24   UUACCAGAUAAAAGCCGCCGAAGA   1
  ***||*=|||||||||||||||||
targets:60   UUAGGCUUAUUUUCGGCGGCUUCU   83

2.0 Sequence 5329 from Patent EP2559767 NA coding protein psRNATarget