ncRNA ID | novel_zma_miR13997 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:112378826-112379012 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089702 |
Length | 24 |
Mature sequence(if miRNA) | 164 - AACGUACUCGACAAAGGGACUGGC - 187 |
Stem-loop(if miRNA) |
--     A           --   -----                --UA           G  A    A     A             ----  ACACUU   UAGUC UUUUGUCGAGU  GUU     ACGCUCGGCAAAGAGG    CUUUGUCGAGU CU GGAC AUAGC CUCGACAAAGAAG    GC      C   ||||| |||||||||||  |||     ||||||||||||||||    ||||||||||| || |||| ||||| |||||||||||||    ||   GUCAG GAAACAGCUCA  CAA     UGUGAGCCGUUUCUCU    GAAACAGCUCA GG UCUG UGUUG GAGUUGUUUCUUC    CG      A CG     G           UG   CCCUC                UGGA           A  A    G     C             GAAA  ACCAAG |
Stem-loop sequence | UAGUCAUUUUGUCGAGUGUUACGCUCGGCAAAGAGGUACUUUGUCGAGUGCUAGGACAAUAGCACUCGACAAAGAAGGCACACUUCAGAACCAGCAAAGCUUCUUUGUUGAGCGUUGUGGUCUAGGAACUCGACAAAGAGGUUCUCUUUGCCGAGUGUCUCCCAACGUACUCGACAAAGGGACUGGC |