ncRNA ID | novel_zma_miR13995 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:71497397-71497469 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089698;SRR2089707 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CAUGCUUGUGGAUUUGUCGCGG - 22 |
Stem-loop(if miRNA) |
CAUG  UG    UUUG      G     ---A    ---  G     CU  UGGA    UCGCGG UCGGG    CCGA   CC G     ||  ||||    |||||| |||||    ||||   ||     GA  ACCU    AGCGCC AGCCU    GGCU   GG A ----  GU    --CG      -     GCCG    UUA  G |
Stem-loop sequence | CAUGCUUGUGGAUUUGUCGCGGGUCGGGACCGACCGGAGGGAUUUCGGGCCGUCCGACCGCGAGCUCCAUGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020548888.1 |
|
1.5 | PREDICTED: Zea mays 50S ribosomal protein L2, chloroplastic-like (LOC109944200), mRNA | NA | coding protein | psRNATarget | |||||||||
AY111993.1 |
|
2.0 | Zea mays CL50607_1 mRNA sequence | NA | coding protein | psRNATarget |