Search result

BaseInfo

ncRNA ID novel_zma_miR13989
Species Zea mays
Class miRNA
Genome position Chr1:109222146-109222213 [-]
Reference genome RefGen_v4
Source SRR2089698
Length 24
Mature sequence(if miRNA) 1 - AUAUUAAGGCUGUAAGGGGUAGGC - 24
Stem-loop(if miRNA) --      -              -AA  A     A
  CUACCC UUGCAGCCUUAAUA   UA UAUAG U
  |||||| ||||||||||||||   || |||||
  GAUGGG AAUGUCGGAAUUAU   AU AUAUC A
CG      G              AUC  C     U
Stem-loop sequence CUACCCUUGCAGCCUUAAUAAAUAAUAUAGAUAUCUAUACUACUAUAUUAAGGCUGUAAGGGGUAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020541454.1
ncRNA:24   CGGAUGGGGAAUGUCGGAAUUAUA   1
  ||||||||||||=||||||||||*
targets:557   GCCUACCCCUUAUAGCCUUAAUAG   580

2.5 PREDICTED: Zea mays uncharacterized LOC103631951 (LOC103631951), mRNA NA coding protein psRNATarget