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BaseInfo

ncRNA ID novel_zma_miR13986
Species Zea mays
Class miRNA
Genome position Chr1:199074231-199074349 [-]
Reference genome RefGen_v4
Source SRR2089698
Length 21
Mature sequence(if miRNA) 99 - AAGGGUAGGAGAGUAAAAUAU - 119
Stem-loop(if miRNA) --           A            U      C                     UAGU
  AAGGGUAGGAG GUAAAAUAUCAC UUGAGA CACAAAUAAACUGAAAUAAGU    A
  ||||||||||| |||||||||||| |||||| |||||||||||||||||||||    C
  UUCUCAUCUUC CAUUUUAUAGUG AACUCU GUGUUUAUUUGAUUUUAUUCG    U
CU           C            U      A                     UUGG
Stem-loop sequence AAGGGUAGGAGAGUAAAAUAUCACUUUGAGACCACAAAUAAACUGAAAUAAGUUAGUACUGGUUGCUUAUUUUAGUUUAUUUGUGAUCUCAAUGUGAUAUUUUACCCUUCUACUCUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU965413.1
ncRNA:21   UAUAAAAUGAGAGGAUGGGAA   1
  |||||||||||||||||*|||
targets:360   AUAUUUUACUCUCCUACACUU   380

1.5 Zea mays clone 285855 mRNA sequence NA coding protein psRNATarget