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BaseInfo

ncRNA ID novel_zma_miR13963
Species Zea mays
Class miRNA
Genome position Chr8:142341515-142341603 [-]
Reference genome RefGen_v4
Source SRR2089698
Length 24
Mature sequence(if miRNA) 66 - AACCGGAUGUGGACGUGGCGUGCC - 89
Stem-loop(if miRNA) --       UG G   G           CUUAA     GC   --A G
  AACCGGA  U GAC UGGCGUGCCAC     UGAAA  UCA   G A
  |||||||  | ||| |||||||||||     |||||  |||   |
  UUGGUCU  G CUG ACCGCACGGUG     ACUUU  AGU   C C
AU       GU G   G           ---AA     --   GAA C
Stem-loop sequence AACCGGAUGUGGACGUGGCGUGCCACCUUAAUGAAAGCUCAAGGACCCAAGUGAUUUCAAAGUGGCACGCCAGGUCGGUGUCUGGUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KJ728059.1
ncRNA:24   CCGUGCGGUGCAGGUGUAGGCCAA   1
  *||*||=|=||||||||||||||*
targets:593   UGCCCGUCGCGUCCACAUCCGGUG   616

3.0 Zea mays clone pUT6205 NAC transcription factor (NAC121) mRNA, partial cds NA coding protein psRNATarget
XM_008654815.2
ncRNA:24   CCGUGCGGUGCAGGUGUAGGCCAA   1
  *||*||=|=||||||||||||||*
targets:996   UGCCCGUCGCGUCCACAUCCGGUG   1019

3.0 PREDICTED: Zea mays NAC domain-containing protein 86 (LOC103633138), mRNA NA coding protein psRNATarget