ncRNA ID | novel_zma_miR13961 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:161084318-161084422 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089698 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGACUAUAGUGGAAUAAAAUGGAG - 24 |
Stem-loop(if miRNA) |
--   A           U     AC        C           A  A      CUA UUUAUUCCACU UAGUC  UAAAUUGU AAAUAUGGAAA UA AAUA   ||| ||||||||||| |||||  |||||||| ||||||||||| || |||G   GGU AAAUAAGGUGA AUCAG  AUUUAACG UUUAUAUCUUU AU UUGA GA   A           U     AU        U           G  A    |
Stem-loop sequence | CUAAUUUAUUCCACUUUAGUCACUAAAUUGUCAAAUAUGGAAAAUAAAAUAGAGUUAUAGUUUCUAUAUUUUGCAAUUUAUAGACUAUAGUGGAAUAAAAUGGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008647122.2 |
|
1.5 | PREDICTED: Zea mays ribonuclease J (LOC103626744), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008647123.2 |
|
1.5 | PREDICTED: Zea mays ribonuclease J (LOC103626744), transcript variant X2, mRNA | NA | coding protein | psRNATarget |