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BaseInfo

ncRNA ID	novel_zma_miR13950
Species	Zea mays
Class	miRNA
Genome position	Chr7:31357797-31357853 [-]
Reference genome	RefGen_v4
Source	SRR2089698
Length	24
Mature sequence(if miRNA)	34 - CGCGCGGGAAGGACGGGACGGCGC - 57
Stem-loop(if miRNA)	--         A   -    A    G   G   CGCGCGGGA GGA CGGG CGGC CUC C   ||||||||| ||| |||| |||| |||   GUGCGCCCU CCU GCUC GCCG GAG G AG         C   C    -    -   U
Stem-loop sequence	CGCGCGGGAAGGACGGGACGGCGCUCGCGUGAGGCCGCUCGCUCCCUCCCGCGUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU957948.1	ncRNA:24   CGCGGCAGGGCAGGAAGGGCGCGC   1   *=*|||||||*|||||=||||||| targets:75   CUCCCGUCCCAUCCUUUCCGCGCG   98 Target Full Sequence	2.5	Zea mays clone 1636142 small GTP-binding protein domain mRNA, complete cds	NA	coding protein	psRNATarget
BT034071.1	ncRNA:24   CGCGGCAGGGCAGGAAGGGCGCGC   1   *=*|||||||*|||||=||||||| targets:23   CUCCCGUCCCAUCCUUUCCGCGCG   46 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0033D05 mRNA, complete cds	NA	coding protein	psRNATarget
EU956575.1	ncRNA:24   CGCGGCAGGGCAGGAAGGGCGCGC   1   *=*|||||||*|||||=||||||| targets:78   CUCCCGUCCCAUCCUUUCCGCGCG   101 Target Full Sequence	2.5	Zea mays clone 1566988 small GTP-binding protein domain mRNA, complete cds	NA	coding protein	psRNATarget
NM_001137264.1	ncRNA:24   CGCGGCAGGGCAGGAAGGGCGCGC   1   *=*|||||||*|||||=||||||| targets:78   CUCCCGUCCCAUCCUUUCCGCGCG   101 Target Full Sequence	2.5	Zea mays uncharacterized LOC100191840 (cl23394_1), mRNA	NA	coding protein	psRNATarget
EZ107851.1	ncRNA:24   CGCGGCAGGGCAGGAAGGGCGCGC   1   *|*|||||*||||||||||||||* targets:1   UCCCCGUCGCGUCCUUCCCGCGCA   24 Target Full Sequence	2.0	TSA: Zea mays contig43509, mRNA sequence	NA	coding protein	psRNATarget
EU952181.1	ncRNA:24   CGCGGCAGGGCAGGAAGGGCGCGC   1   *|*|||||*||||||||||||||* targets:435   UCCCCGUCGCGUCCUUCCCGCGCA   458 Target Full Sequence	2.0	Zea mays clone 1217166 AKIN gamma mRNA, complete cds	NA	coding protein	psRNATarget
NM_001291619.1	ncRNA:24   CGCGGCAGGGCAGGAAGGGCGCGC   1   *|*|||||*||||||||||||||* targets:316   UCCCCGUCGCGUCCUUCCCGCGCA   339 Target Full Sequence	2.0	Zea mays AKIN gamma (LOC100280507), mRNA	NA	coding protein	psRNATarget
BT063795.1	ncRNA:24   CGCGGCAGGGCAGGAAGGGCGCGC   1   *|*|||||*||||||||||||||* targets:316   UCCCCGUCGCGUCCUUCCCGCGCA   339 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0108K17 mRNA, complete cds	NA	coding protein	psRNATarget
AY105248.1	ncRNA:24   CGCGGCAGGGCAGGAAGGGCGCGC   1   *|*|||||*||||||||||||||* targets:372   UCCCCGUCGCGUCCUUCCCGCGCA   395 Target Full Sequence	2.0	Zea mays PCO134665 mRNA sequence	NA	coding protein	psRNATarget