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BaseInfo

ncRNA ID	novel_zma_miR13947
Species	Zea mays
Class	miRNA
Genome position	Chr7:126456219-126456307 [-]
Reference genome	RefGen_v4
Source	SRR2089698
Length	24
Mature sequence(if miRNA)	66 - AAGGAUUCAAACAGGAAGAGCUAG - 89
Stem-loop(if miRNA)	--             G                   A A     A   AAGGAUUCAAACA GAAGAGCUAGAAGUGACUA A UGAUA A   ||||||||||||| ||||||||||||||||||| | ||||| A   UUUCUAGGUUUGU CUUCUCGAUUUUCACUGAU U ACUAU A GA             A                   C A     A
Stem-loop sequence	AAGGAUUCAAACAGGAAGAGCUAGAAGUGACUAAAAUGAUAAAAAAUAUCAAUCUAGUCACUUUUAGCUCUUCAUGUUUGGAUCUUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY107765.1	ncRNA:24   GAUCGAGAAGGACAAACUUAGGAA   1   *|=*=||||*|||||||||||||| targets:352   GUGUUUCUUGCUGUUUGAAUCCUU   375 Target Full Sequence	1.0	Zea mays PCO122031 mRNA sequence	NA	coding protein	psRNATarget
BT055363.1	ncRNA:24   GAUCGAGAAGGACAAACUUAGGAA   1   *|=*=||||*|||||||||||||| targets:294   GUGUUUCUUGCUGUUUGAAUCCUU   317 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0078F16 mRNA, complete cds	NA	coding protein	psRNATarget
BT016447.1	ncRNA:24   GAUCGAGAAGGACAAACUUAGGAA   1   *|=*=||||*|||||||||||||| targets:333   GUGUUUCUUGCUGUUUGAAUCCUU   356 Target Full Sequence	1.0	Zea mays clone Contig280 mRNA sequence	NA	coding protein	psRNATarget
XM_008663498.2	ncRNA:24   GAUCGAGAAGGACAAACUUAGGAA   1   *|=*=||||*|||||||||||||| targets:397   GUGUUUCUUGCUGUUUGAAUCCUU   420 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (IDP2353), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008663497.2	ncRNA:24   GAUCGAGAAGGACAAACUUAGGAA   1   *|=*=||||*|||||||||||||| targets:438   GUGUUUCUUGCUGUUUGAAUCCUU   461 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (IDP2353), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020544966.1	ncRNA:24   GAUCGAGAAGGACAAACUUAGGAA   1   *|=*=||||*|||||||||||||| targets:382   GUGUUUCUUGCUGUUUGAAUCCUU   405 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (IDP2353), transcript variant X1, mRNA	NA	coding protein	psRNATarget