Search result

BaseInfo

ncRNA ID novel_zma_miR13946
Species Zea mays
Class miRNA
Genome position Chr7:155331765-155331883 [-]
Reference genome RefGen_v4
Source SRR2089698
Length 21
Mature sequence(if miRNA) 99 - AAGGGUAGGAGAGUAAAAUAU - 119
Stem-loop(if miRNA) --           AG        C      A A          A             G A
  AAGGGUAGGAG  UAAAAUAU ACUUUG G UUAUAAAUAA UUGAAAUAAGCUA C U
  |||||||||||  |||||||| |||||| | |||||||||| ||||||||||||| |
  UUCUCAUCCUC  AUUUUAUA UGAAAC C AGUGUUUAUU GACUUUAUUCGAU G U
CC           CA        A      - C          C             G G
Stem-loop sequence AAGGGUAGGAGAGUAAAAUAUCACUUUGAGAUUAUAAAUAAAUUGAAAUAAGCUAGCAUUGGGUAGCUUAUUUCAGCUUAUUUGUGACCCAAAGUAAUAUUUUAACCUCCUACUCUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU965413.1
ncRNA:21   UAUAAAAUGAGAGGAUGGGAA   1
  |||||||||||||||||*|||
targets:360   AUAUUUUACUCUCCUACACUU   380

1.5 Zea mays clone 285855 mRNA sequence NA coding protein psRNATarget