ncRNA ID | novel_zma_miR13935 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:136575738-136575879 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089698;SRR2089704 |
Length | 24 |
Mature sequence(if miRNA) | 119 - ACUAAGGGCGUGUUUGGUGUGGCG - 142 |
Stem-loop(if miRNA) |
--A  A                                   C  U                       -      CU AGGGCGUGUUUGGUGUGGCGCCUAAGCCGCCACAC GC CCACACUUUUAAGCCACAAGUGU GGC    || ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||G    GA UCCCGCACAAACCACACCGCGGAUUCGGCGGUGUG CG GGUGUGAAAAUUCGGUGUUCACA CCG CCA  A                                   A  C                       A   |
Stem-loop sequence | ACUAAGGGCGUGUUUGGUGUGGCGCCUAAGCCGCCACACCGCUCCACACUUUUAAGCCACAAGUGUGGCGGCCAACACUUGUGGCUUAAAAGUGUGGCGCAGUGUGGCGGCUUAGGCGCCACACCAAACACGCCCUAAGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY110402.2 |
|
2.5 | Zea mays CL2596_1 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_020552994.1 |
|
2.5 | PREDICTED: Zea mays Glycine-rich RNA-binding protein RZ1C (TIDP3245), transcript variant X1, mRNA | NA | coding protein | psRNATarget |