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BaseInfo

ncRNA ID	ath-miRf10147-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - GAAGAAGGCUCUGAAGCUUUUC - NA
Stem-loop(if miRNA)	GG    G    U    --            UC    UU UG     G G   UCGA UGAA AGCU  GGAGUCUUCUUU  UUCC  G  CUCGA U U   |||| |||| ||||  ||||||||||||  ||||  |  ||||| |   AGCU ACUU UCGA  UCUCGGAAGAAG  AAGG  C  GAGUU G A UG    -    U    AG            -U    -- GU     G U
Stem-loop sequence	GGUCGAGUGAAUAGCUGGAGUCUUCUUUUCUUCCUUGUGCUCGAGUGUAUGGUUGAGUGCGGAAUGAAGAAGGCUCUGAAGCUUUUCAUCGAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183194.1	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   ||*||||||||||||||||||| targets:630   GACAAGCUUCAGAGCCUUCUUC   651 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   ||*||||||||||||||||||| targets:981   GACAAGCUUCAGAGCCUUCUUC   1002 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   ||*||||||||||||||||||| targets:1790   GACAAGCUUCAGAGCCUUCUUC   1811 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AK117687.1	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   **=|||||||||||*||||||| targets:158   CUGAAGCUUCAGAGACUUCUUC   179 Target Full Sequence	1.5	Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL17-34-N18	NA	coding protein	psRNATarget
BX830085.1	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   ||||=||||*|||||||||||| targets:17   GAAAGGCUUGAGAGCCUUCUUC   38 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK221481.1	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   ||||=||||*|||||||||||| targets:26   GAAAGGCUUGAGAGCCUUCUUC   47 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for aldo/keto reductase-like protein, complete cds, clone: RAFL07-43-L22	NA	coding protein	psRNATarget
NM_124738.4	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   ||||=||||*|||||||||||| targets:60   GAAAGGCUUGAGAGCCUUCUUC   81 Target Full Sequence	2.5	Arabidopsis thaliana NAD(P)-linked oxidoreductase superfamily protein (PLR1), mRNA	NAD(P)-linked oxidoreductase superfamily protein(PLR1)	coding protein	psRNATarget
AK228698.1	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   *=||||||||||||*||||||= targets:1699   UGAAAGCUUCAGAGACUUCUUU   1720 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for putative kinesin heavy chain, complete cds, clone: RAFL16-05-D14	NA	coding protein	psRNATarget
NM_179950.3	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   *=||||||||||||*||||||= targets:1819   UGAAAGCUUCAGAGACUUCUUU   1840 Target Full Sequence	2.5	Arabidopsis thaliana ATP binding microtubule motor family protein mRNA	ATP binding microtubule motor family protein(AT2G37420)	coding protein	psRNATarget
NM_001336659.1	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   *=||||||||||||*||||||= targets:1837   UGAAAGCUUCAGAGACUUCUUU   1858 Target Full Sequence	2.5	Arabidopsis thaliana ATP binding microtubule motor family protein mRNA	ATP binding microtubule motor family protein(AT2G37420)	coding protein	psRNATarget
AK228798.1	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   *||*||||||*||||||||||| targets:301   CAACAGCUUCUGAGCCUUCUUC   322 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-11-K15	NA	coding protein	psRNATarget
NM_001342912.1	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   *||*||||||*||||||||||| targets:266   CAACAGCUUCUGAGCCUUCUUC   287 Target Full Sequence	2.5	Arabidopsis thaliana nucleolar-like protein mRNA	nucleolar-like protein(AT5G06930)	coding protein	psRNATarget
NM_001342911.1	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   *||*||||||*||||||||||| targets:610   CAACAGCUUCUGAGCCUUCUUC   631 Target Full Sequence	2.5	Arabidopsis thaliana nucleolar-like protein mRNA	nucleolar-like protein(AT5G06930)	coding protein	psRNATarget
NM_120775.4	ncRNA:22   CUUUUCGAAGUCUCGGAAGAAG   1   *||*||||||*||||||||||| targets:301   CAACAGCUUCUGAGCCUUCUUC   322 Target Full Sequence	2.5	Arabidopsis thaliana nucleolar-like protein mRNA	nucleolar-like protein(AT5G06930)	coding protein	psRNATarget