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BaseInfo

ncRNA ID osa-miRf10989-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UUUCCAGUCGGAGGUUGGUCACU - NA
Stem-loop(if miRNA)       ---    U  A         UUU C      G   UC     UUGU
GAUCUG   GACC AC UCCGACUGG   C AGUCGG GGC  UUGAG    U
||||||   |||| || |||||||||   | |||||| |||  |||||
CUAGGC   CUGG UG AGGCUGACC   G UCAGCC UCG  GACUU    G
      UCA    U  G         UUU A      G   UU     UGAU
Stem-loop sequence GAUCUGGACCUACAUCCGACUGGUUUCCAGUCGGGGGCUCUUGAGUUGUUGUAGUUUCAGUUGCUGCCGACUAGUUUCCAGUCGGAGGUUGGUCACUCGGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015793741.1
ncRNA:23   UCACUGGUUGGAGGCUGACCUUU   1
  ||||||||=||*|||||||||||
targets:532   AGUGACCAGCCGCCGACUGGAAA   554

2.5 PREDICTED: Oryza sativa Japonica Group neuromodulin-like (LOC107281910), mRNA neuromodulin-like(LOC107281910) coding protein psRNATarget
AK064489.1
ncRNA:23   UCACUGGUUGGAGGCUGACCUUU   1
  ||||||||=||*|||||||||||
targets:699   AGUGACCAGCCGCCGACUGGAAA   721

2.5 Oryza sativa Japonica Group cDNA clone:002-111-B12, full insert sequence NA coding protein psRNATarget
XM_015755520.1
ncRNA:23   UCACUGGUUGGAGGCUGACCUUU   1
  ||||||||=||*|||||||||||
targets:929   AGUGACCAGCCGCCGACUGGAAA   951

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346574 (LOC4346574), mRNA uncharacterized LOC4346574(LOC4346574) coding protein psRNATarget
XM_015781092.1
ncRNA:23   UCACUGGUUGGAGGCUGACCUUU   1
  =||||=|||||*|||||||||||
targets:1136   GGUGAUCAACCCCCGACUGGAAA   1158

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280796 (LOC107280796), transcript variant X2, mRNA uncharacterized LOC107280796(LOC107280796) coding protein psRNATarget
XM_015781091.1
ncRNA:23   UCACUGGUUGGAGGCUGACCUUU   1
  =||||=|||||*|||||||||||
targets:3915   GGUGAUCAACCCCCGACUGGAAA   3937

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280796 (LOC107280796), transcript variant X1, mRNA uncharacterized LOC107280796(LOC107280796) coding protein psRNATarget