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BaseInfo

ncRNA ID novel_zma_miR13912
Species Zea mays
Class miRNA
Genome position Chr4:108051731-108051802 [+]
Reference genome RefGen_v4
Source SRR2089698
Length 23
Mature sequence(if miRNA) 50 - GCAGGGAACGGAGCGAGCUGACA - 72
Stem-loop(if miRNA) --      -  UAG   --A       ----AG      A
  UCAGCU GU   CCG   UUUGCGU      CGCUCA U
  |||||| ||   |||   |||||||      |||||| C
  AGUCGA CG   GGC   GGACGCA      GUGGGU A
AC      G  --A   AAG       GUCAGA      U
Stem-loop sequence UCAGCUGUUAGCCGAUUUGCGUAGCGCUCAAUCAUUGGGUGAGACUGACGCAGGGAACGGAGCGAGCUGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538415.1
ncRNA:23   ACAGUCGAGCGAGGCAAGGGACG   1
  |||||||||||||||||||||||
targets:62   UGUCAGCUCGCUCCGUUCCCUGC   84

0.0 PREDICTED: Zea mays uncharacterized LOC109939932 (LOC109939932), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020538416.1
ncRNA:23   ACAGUCGAGCGAGGCAAGGGACG   1
  |||||||||||||||||||||||
targets:63   UGUCAGCUCGCUCCGUUCCCUGC   85

0.0 PREDICTED: Zea mays uncharacterized LOC109939932 (LOC109939932), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020538414.1
ncRNA:23   ACAGUCGAGCGAGGCAAGGGACG   1
  |||||||||||||||||||||||
targets:59   UGUCAGCUCGCUCCGUUCCCUGC   81

0.0 PREDICTED: Zea mays uncharacterized LOC109939932 (LOC109939932), transcript variant X1, mRNA NA coding protein psRNATarget