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BaseInfo

ncRNA ID osa-miRf10988-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - CCCCGGGAUCUUUAGUCCCGGUU - NA
Stem-loop(if miRNA)   GC -  C      U                  C  AA     UA  U
AG  C CC CCGGGA CUUUAGUCCCGGUUGGUG UA  GAUCG  AC U
||  | || |||||| |||||||||||||||||| ||  |||||  ||
UC  G GG GGCCCU GAAAUCAGGGCCAACCAU GU  UUGGC  UG U
  UA U  U      U                  U  GG     CC  A
Stem-loop sequence AGGCCCCCCCGGGAUCUUUAGUCCCGGUUGGUGCUAAAGAUCGUAACUUUAGUCCCGGUUGGUGUUACCAACCGGGACUAAAGUUCCCGGUGGUGAUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI404518.1
ncRNA:23   UUGGCCCUGAUUUCUAGGGCCCC   1
  |||=|||||||||||||||||*|
targets:21   AACUGGGACUAAAGAUCCCGGUG   43

1.5 Sequence 2643 from Patent EP2074227 NA coding protein psRNATarget
LQ236648.1
ncRNA:23   UUGGCCCUGAUUUCUAGGGCCCC   1
  |||=|||||||||||||||||*|
targets:21   AACUGGGACUAAAGAUCCCGGUG   43

1.5 Sequence 2643 from Patent EP2985353 NA coding protein psRNATarget
JB164979.1
ncRNA:23   UUGGCCCUGAUUUCUAGGGCCCC   1
  |||=|||||||||||||||||*|
targets:21   AACUGGGACUAAAGAUCCCGGUG   43

1.5 Sequence 2643 from Patent EP2559767 NA coding protein psRNATarget