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BaseInfo

ncRNA ID osa-miRf10987-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UAAUGCCCGUCACAGAUGAGU - NA
Stem-loop(if miRNA)    GACC                       AUA     UCACAA    G    CUCAAU     CUAA
GAU    CUUAUCUGUGACGGGCAUUAACU   GCCCG      AUGA UCAU      CGGGC    G
|||    |||||||||||||||||||||||   |||||      |||| ||||      |||||
CUA    GAGUAGACACUGCCCGUAAUUGA   CGGGC      UGCU AGUA      GCCCG    U
   AUAU                       AUC     UAACUC    G    AACACU     UAAU
Stem-loop sequence GAUGACCCUUAUCUGUGACGGGCAUUAACUAUAGCCCGUCACAAAUGAGUCAUCUCAAUCGGGCCUAAGUUAAUGCCCGUCACAAAUGAGUCGUCUCAAUCGGGCCUAAGUUAAUGCCCGUCACAGAUGAGUAUAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288447.1
ncRNA:21   UGAGUAGACACUGCCCGUAAU   1
  |*|||||*|||||||||||||
targets:425   AGUCAUCGGUGACGGGCAUUA   445

1.0 Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence NA coding protein psRNATarget
LQ235984.1
ncRNA:21   UGAGUAGACACUGCCCGUAAU   1
  ||*=|||*|||||||||||||
targets:15   ACCUAUCCGUGACGGGCAUUA   35

3.0 Sequence 1979 from Patent EP2985353 NA coding protein psRNATarget
HI403854.1
ncRNA:21   UGAGUAGACACUGCCCGUAAU   1
  ||*=|||*|||||||||||||
targets:15   ACCUAUCCGUGACGGGCAUUA   35

3.0 Sequence 1979 from Patent EP2074227 NA coding protein psRNATarget
JB164315.1
ncRNA:21   UGAGUAGACACUGCCCGUAAU   1
  ||*=|||*|||||||||||||
targets:15   ACCUAUCCGUGACGGGCAUUA   35

3.0 Sequence 1979 from Patent EP2559767 NA coding protein psRNATarget
AK107543.1
ncRNA:21   UGAGUAGACACUGCCCGUAAU   1
  =||||||*|||||||||*|||
targets:1502   GCUCAUCGGUGACGGGCUUUA   1522

2.5 Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence NA coding protein psRNATarget