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BaseInfo

ncRNA ID novel_zma_miR13874
Species Zea mays
Class miRNA
Genome position Chr1:36241681-36241791 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 88 - CGGACAUGUGCGGUGUGCACCGGA - 111
Stem-loop(if miRNA) --        C    G   --   A  C G   C  --AA    GAACU    C    AAAU
  CGGUGCGC ACCG ACA  UCC GG G GCC AG    GUCA     CCAA GGUC    U
  |||||||| |||| |||  ||| || | ||| ||    ||||     |||| ||||
  GCCACGUG UGGC UGU  AGG CC C CGG UC    CAGU     GGUU UCAG    C
AG        -    G   AC   -  A G   -  GGUG    -----    -    CAAC
Stem-loop sequence CGGUGCGCCACCGGACAUCCAGGCGGGCCCAGAAGUCAGAACUCCAACGGUCAAAUUCCAACGACUUUGGUGACGUGGCUGGCGCACCGGACAUGUGCGGUGUGCACCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241238.1
ncRNA:24   AGGCCACGUGUGGCGUGUACAGGC   1
  |||||||=||||||*|||||||||
targets:9   UCCGGUGUACACCGGACAUGUCCG   32

2.5 Sequence 7233 from Patent EP2985353 NA coding protein psRNATarget
JB169569.1
ncRNA:24   AGGCCACGUGUGGCGUGUACAGGC   1
  |||||||=||||||*|||||||||
targets:9   UCCGGUGUACACCGGACAUGUCCG   32

2.5 Sequence 7233 from Patent EP2559767 NA coding protein psRNATarget
HI409108.1
ncRNA:24   AGGCCACGUGUGGCGUGUACAGGC   1
  |||||||=||||||*|||||||||
targets:9   UCCGGUGUACACCGGACAUGUCCG   32

2.5 Sequence 7233 from Patent EP2074227 NA coding protein psRNATarget