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BaseInfo

ncRNA ID	novel_zma_miR13869
Species	Zea mays
Class	miRNA
Genome position	Chr1:35609432-35609489 [+]
Reference genome	RefGen_v4
Source	SRR1997866
Length	24
Mature sequence(if miRNA)	1 - CACCUGAAUUUGGUGGAUAUCGGA - 24
Stem-loop(if miRNA)	---CA     -A     U GA   CGG    G      CCUGA  UUUGG G  UAU   AAAA A      |||||  ||||| |  |||   ||||      GGACU  AAACC C  AUA   UUUU A UUGUG     AA     - UC   ---    A
Stem-loop sequence	CACCUGAAUUUGGUGGAUAUCGGAAAAGAAAUUUUAUACUCCCAAAAAUCAGGGUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU975442.1	ncRNA:24   AGGCUAUAGGUGGUUUAAGUCCAC   1   ||=*=||||||||||||||||||| targets:2024   UCUAGUAUCCACCAAAUUCAGGUG   2047 Target Full Sequence	0.0	Zea mays clone 490558 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151964.1	ncRNA:24   AGGCUAUAGGUGGUUUAAGUCCAC   1   ||=*=||||||||||||||||||| targets:2024   UCUAGUAUCCACCAAAUUCAGGUG   2047 Target Full Sequence	0.0	Zea mays uncharacterized LOC100278809 (LOC100278809), mRNA	NA	coding protein	psRNATarget
EU947799.1	ncRNA:24   AGGCU-AUAGGUGGUUUAAGUCCAC   1   |||*|-||||||||||||||||||| targets:259   UCCUAAUAUCCACCAAAUUCAGGUG   283 Target Full Sequence	2.0	Zea mays clone 359866 mRNA sequence	NA	coding protein	psRNATarget
EU940959.1	ncRNA:24   AGGCUAUAGGUGGUUUAAGUCCAC   1   ||=*||||||||||||||||*||| targets:246   UCUAAUAUCCACCAAAUUCAUGUG   269 Target Full Sequence	1.5	Zea mays clone 1222375 mRNA sequence	NA	coding protein	psRNATarget
XM_008654188.2	ncRNA:24   AGGCUAUAGGUGGUUUAAGUCCAC   1   |==*|||*=||||||||||||||| targets:1201   UUUAAUACUCACCAAAUUCAGGUG   1224 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103632369 (LOC103632369), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008654189.2	ncRNA:24   AGGCUAUAGGUGGUUUAAGUCCAC   1   |==*|||*=||||||||||||||| targets:1421   UUUAAUACUCACCAAAUUCAGGUG   1444 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103632369 (LOC103632369), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU943180.1	ncRNA:24   AGGCUAU-AGGUGGUUUAAGUCCAC   1   |=|*|||-|*||||||||||||||| targets:1663   UUCAAUAAUACACCAAAUUCAGGUG   1687 Target Full Sequence	3.0	Zea mays clone 1579524 mRNA sequence	NA	coding protein	psRNATarget