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BaseInfo

ncRNA ID novel_zma_miR13861
Species Zea mays
Class miRNA
Genome position Chr1:279503243-279503304 [-]
Reference genome RefGen_v4
Source SRR1997866
Length 23
Mature sequence(if miRNA) 1 - UAAAUUCUUUUGUAGCAACGGUC - 23
Stem-loop(if miRNA) --      G    U     --    G   C A
  CCGUUG UUGC AAAGG  UUAG GAC G C
  |||||| |||| |||||  |||| ||| | A
  GGCAAC GAUG UUUCU  AAUC CUG C G
CU      -    U     UA    G   A U
Stem-loop sequence CCGUUGGUUGCUAAAGGUUAGGGACCGACAGUCAGUCGCUAAAUUCUUUUGUAGCAACGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008671624.2
ncRNA:23   CUGGCAACGAUGUUUUCUUAAAU   1
  |||=||*||||||||||*|||||
targets:127   GACUGUCGCUACAAAAGUAUUUA   149

2.5 PREDICTED: Zea mays Transcription repressor OFP6 (LOC103647057), mRNA NA coding protein psRNATarget