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BaseInfo

ncRNA ID	novel_zma_miR13857
Species	Zea mays
Class	miRNA
Genome position	Chr6:154013731-154013853 [+]
Reference genome	RefGen_v4
Source	SRR1583942
Length	21
Mature sequence(if miRNA)	103 - UUCUCUGAUGAUGCCUCUAAG - 123
Stem-loop(if miRNA)	--       U      AG    A                 CCAUUUUUAUAGUUAAUC    CAG    AG   UAGAGGC UCAUCA  GAAC UUUCUCCUUCUUUAGGU                  GUCG   CAUG  U   ||||||| ||||||  |||| |||||||||||||||||                  ||||   ||||  C   AUCUCCG AGUAGU  CUUG AAAGAGGAAGAAGUCCA                  CAGU   GUAC  C GA       U      CU    G                 ------------------    --A    CU
Stem-loop sequence	UAGAGGCUUCAUCAAGGAACAUUUCUCCUUCUUUAGGUCCAUUUUUAUAGUUAAUCGUCGCAGCAUGAGUCCUCCAUGAUGACACCUGAAGAAGGAGAAAGGUUCUCUGAUGAUGCCUCUAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020545605.1	ncRNA:21   GAAUCUCCGUAGUAGUCUCUU   1   |**||||||||||||||||*| targets:2182   CCAAGAGGCAUCAUCAGAGCA   2202 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103640978 (LOC103640978), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008664408.2	ncRNA:21   GAAUCUCCGUAGUAGUCUCUU   1   |**||||||||||||||||*| targets:2422   CCAAGAGGCAUCAUCAGAGCA   2442 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103640978 (LOC103640978), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020545604.1	ncRNA:21   GAAUCUCCGUAGUAGUCUCUU   1   |**||||||||||||||||*| targets:2422   CCAAGAGGCAUCAUCAGAGCA   2442 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103640978 (LOC103640978), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020545603.1	ncRNA:21   GAAUCUCCGUAGUAGUCUCUU   1   |**||||||||||||||||*| targets:2425   CCAAGAGGCAUCAUCAGAGCA   2445 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103640978 (LOC103640978), transcript variant X1, mRNA	NA	coding protein	psRNATarget