Search result

BaseInfo

ncRNA ID novel_zma_miR13852
Species Zea mays
Class miRNA
Genome position Chr6:149415451-149415503 [+]
Reference genome RefGen_v4
Source SRR1583942
Length 24
Mature sequence(if miRNA) 1 - GUAGACUCGGUCUUUGAGCAUCCG - 24
Stem-loop(if miRNA) --    A    G         AU   U
  GUAG CUCG UCUUUGAGC  CCG U
  |||| |||| |||||||||  ||| A
  CGUC GAGC GGGAGCUCG  GGC U
UU    -    -         AC   G
Stem-loop sequence GUAGACUCGGUCUUUGAGCAUCCGUUAUGCGGCAGCUCGAGGGCGAGCUGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538874.1
ncRNA:24   GCCUACGAGUUUCUGGCUCAGAUG   1
  ||||||||||||||||||||||||
targets:1308   CGGAUGCUCAAAGACCGAGUCUAC   1331

0.0 PREDICTED: Zea mays hypothetical protein (cl50727_1), transcript variant X3, mRNA NA coding protein psRNATarget