ncRNA ID | novel_zma_miR13845 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:205306496-205306585 [+] |
Reference genome | RefGen_v4 |
Source | SRR1997866 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGGCGGACUGUCCGCGGCCUGGU - 24 |
Stem-loop(if miRNA) |
A   --    CU -        CUGGUGCGCUGCUGGGACUUCUGC  GGG  CGGA  G UCCGCGGC                        C  |||  ||||  | ||||||||                        U  UGC  GCCU  G CAGGCCGG                        G A   AC    -- G        GGUCCCGCGCCUGGCAGGCCGGCA |
Stem-loop sequence | AGGGCGGACUGUCCGCGGCCUGGUGCGCUGCUGGGACUUCUGCCUGACGGCCGGACGGUCCGCGCCCUGGGGCCGGACGGUCCGCACGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020539115.1 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA | NA | coding protein | psRNATarget | |||||||||
BT088349.1 |
|
1.0 | Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001196968.1 |
|
1.0 | Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA | NA | coding protein | psRNATarget |