Search result

BaseInfo

ncRNA ID novel_zma_miR13845
Species Zea mays
Class miRNA
Genome position Chr1:205306496-205306585 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 1 - AGGGCGGACUGUCCGCGGCCUGGU - 24
Stem-loop(if miRNA) A   --    CU -        CUGGUGCGCUGCUGGGACUUCUGC
 GGG  CGGA  G UCCGCGGC                        C
 |||  ||||  | ||||||||                        U
 UGC  GCCU  G CAGGCCGG                        G
A   AC    -- G        GGUCCCGCGCCUGGCAGGCCGGCA
Stem-loop sequence AGGGCGGACUGUCCGCGGCCUGGUGCGCUGCUGGGACUUCUGCCUGACGGCCGGACGGUCCGCGCCCUGGGGCCGGACGGUCCGCACGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539115.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGA   1
  *||||||||||||||||||||||*
targets:2707   CCCAGGCCGCGGACAGUCCGCCCC   2730

1.0 PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA NA coding protein psRNATarget
BT088349.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGA   1
  *=|||||||||||||||||||||*
targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287

1.0 Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds NA coding protein psRNATarget
NM_001196968.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGA   1
  *=|||||||||||||||||||||*
targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287

1.0 Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA NA coding protein psRNATarget