ncRNA ID | novel_zma_miR13843 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:174001158-174001366 [+] |
Reference genome | RefGen_v4 |
Source | SRR1997866 |
Length | 24 |
Mature sequence(if miRNA) | 186 - UGGAAACAUGAUUUUCACUGGCGG - 209 |
Stem-loop(if miRNA) |
--    A      -    A       UU   A    C    A                              CC    G  UC             AU  G    C   GCCA UGGAAA CAUG UUUUCAC  ACG UUUU UUAA CAGCCCGCCAGUGCUAAUGUUAUUUCCACU  GCGG CU  UUAAGAAAAUCAC  GU GAAA A   |||| |||||| |||| |||||||  ||| |||| |||| ||||||||||||||||||||||||||||||  |||| ||  |||||||||||||  || |||| U   CGGU ACUUUU GUAC AAAGGUG  UGC AAAA AAUU GUUGGGUGGUCGCGAUUACAAUAAAGGUGA  CGCC GA  AAUUCUUUUGGUG  CA UUUU G GG    C      A    -       UC   C    -    C                              -C    A  CU             GU  G    A |
Stem-loop sequence | GCCAAUGGAAACAUGAUUUUCACUUACGAUUUUCUUAAACAGCCCGCCAGUGCUAAUGUUAUUUCCACUCCGCGGGCUUCUUAAGAAAAUCACAUGUGGAAACAUGAUUUUGACUGGUGGUUUUCUUAAUCAGACCGCCAGUGGAAAUAACAUUAGCGCUGGUGGGUUGCUUAAAAAACCGUCUGUGGAAACAUGAUUUUCACUGGCGG |