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BaseInfo

ncRNA ID novel_zma_miR13843
Species Zea mays
Class miRNA
Genome position Chr1:174001158-174001366 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 186 - UGGAAACAUGAUUUUCACUGGCGG - 209
Stem-loop(if miRNA) --    A      -    A       UU   A    C    A                              CC    G  UC             AU  G    C
  GCCA UGGAAA CAUG UUUUCAC  ACG UUUU UUAA CAGCCCGCCAGUGCUAAUGUUAUUUCCACU  GCGG CU  UUAAGAAAAUCAC  GU GAAA A
  |||| |||||| |||| |||||||  ||| |||| |||| ||||||||||||||||||||||||||||||  |||| ||  |||||||||||||  || |||| U
  CGGU ACUUUU GUAC AAAGGUG  UGC AAAA AAUU GUUGGGUGGUCGCGAUUACAAUAAAGGUGA  CGCC GA  AAUUCUUUUGGUG  CA UUUU G
GG    C      A    -       UC   C    -    C                              -C    A  CU             GU  G    A
Stem-loop sequence GCCAAUGGAAACAUGAUUUUCACUUACGAUUUUCUUAAACAGCCCGCCAGUGCUAAUGUUAUUUCCACUCCGCGGGCUUCUUAAGAAAAUCACAUGUGGAAACAUGAUUUUGACUGGUGGUUUUCUUAAUCAGACCGCCAGUGGAAAUAACAUUAGCGCUGGUGGGUUGCUUAAAAAACCGUCUGUGGAAACAUGAUUUUCACUGGCGG