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BaseInfo

ncRNA ID osa-miRf10981-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UGGGUUCGCGGCUGACCCACUUA - NA
Stem-loop(if miRNA)                CUAAC       A    C  A    C          C C
UAGGGGUGUAAGUGG     CCGCGAA CCCA UU UAGG UAAAAUAAGC G G
|||||||||||||||     ||||||| |||| || |||| |||||||||| | A
AUCCCCACAUUCACC     GGCGCUU GGGU AA AUCC GUUUUAUUCG C A
               CAGUC       -    A  A    A          C C
Stem-loop sequence UAGGGGUGUAAGUGGCUAACCCGCGAAACCCACUUAUAGGCUAAAAUAAGCCGCGAACCCGCUUAUUUUGACCUAAAAAUGGGUUCGCGGCUGACCCACUUACACCCCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015794926.1
ncRNA:23   AUUCACCCAGUCGGCGCUUGGGU   1
  |||||||||||||||||||||=|
targets:459   UAAGUGGGUCAGCCGCGAACCUA   481

1.5 PREDICTED: Oryza sativa Japonica Group disease resistance protein RGA2 (LOC4346196), transcript variant X2, mRNA disease resistance protein RGA2(LOC4346196) coding protein psRNATarget
XM_015794925.1
ncRNA:23   AUUCACCCAGUCGGCGCUUGGGU   1
  |||||||||||||||||||||=|
targets:592   UAAGUGGGUCAGCCGCGAACCUA   614

1.5 PREDICTED: Oryza sativa Japonica Group disease resistance protein RGA2 (LOC4346196), transcript variant X1, mRNA disease resistance protein RGA2(LOC4346196) coding protein psRNATarget
AK099583.1
ncRNA:23   AUUCACCCAGUCGGCGCUUGGGU   1
  |||||||||||||||||||||=|
targets:264   UAAGUGGGUCAGCCGCGAACCUA   286

1.5 Oryza sativa Japonica Group cDNA clone:J013042A20, full insert sequence NA coding protein psRNATarget
AK066654.1
ncRNA:23   AUUCACCCAGUCGGCGCUUGGGU   1
  *||||||*|||*|||||||||||
targets:2799   CAAGUGGAUCACCCGCGAACCCA   2821

2.5 Oryza sativa Japonica Group cDNA clone:J013069H17, full insert sequence NA coding protein psRNATarget
AK110217.1
ncRNA:23   AUUCACCCAGUCGGCGCUUGGGU   1
  |***|||||||||||||*||||*
targets:1443   UCCAUGGGUCAGCCGCGUACCCC   1465

2.5 Oryza sativa Japonica Group cDNA clone:002-162-D07, full insert sequence NA coding protein psRNATarget