Search result

BaseInfo

ncRNA ID novel_zma_miR13799
Species Zea mays
Class miRNA
Genome position Chr8:123216811-123216990 [-]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 1 - GCAGGCCUGCGACUGACGAGGAAA - 24
Stem-loop(if miRNA) --                   C                                                CAAC G  G GGA    AGA
  UCCUCGUUAGUCGCAGGCC GCAGCAGGUGGGGAGGCGAGACACGAGCGCCAGGCGACGUAACCGCCG    A GU G   GGCG   C
  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    | || |   ||||   A
  AGGAGCAGUCAGCGUCCGG CGUCGUCCACCCCUCCGCUCUGUGCUCGCGGUCCGCUGCAUUGGCGGC    U CA C   CCGC   C
AA                   A                                                -CAA G  G GGA    GAG
Stem-loop sequence UCCUCGUUAGUCGCAGGCCCGCAGCAGGUGGGGAGGCGAGACACGAGCGCCAGGCGACGUAACCGCCGCAACAGGUGGGGAGGCGAGACACGAGCGCCAGGCGACGUAACCGGCGGUUACGUCGCCUGGCGCUCGUGUCUCGCCUCCCCACCUGCUGCAGGCCUGCGACUGACGAGGAAA