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BaseInfo

ncRNA ID	novel_zma_miR13795
Species	Zea mays
Class	miRNA
Genome position	Chr8:129971024-129971130 [-]
Reference genome	RefGen_v4
Source	SRR1997866
Length	24
Mature sequence(if miRNA)	84 - GUGUUGGGGCGAAGGCGAAGAUGC - 107
Stem-loop(if miRNA)	--    U          CG   -A     CC UUAG  CGA  C     -----C       GUGU GGGGCGAAGG  AAG  UGCCA  C    CU   UG CUUCG      CAGCC   |||| ||||||||||  |||  |||||  |    ||   || |||||      ||||U   CGCA CCCUGCUUCC  UUC  ACGGU  G    GA   AC GAAGC      GUCGC UG    -          CA   AG     CA --UA  ---  A     AACCAC
Stem-loop sequence	GUGUUGGGGCGAAGGCGAAGAUGCCACCCUUAGCUCGAUGCCUUCGCCAGCCUCGCUGCACCAACGAAGACAAGAUGACUGGCAGACUUACCCUUCGUCCCACGCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170196.1	ncRNA:24   CGUAGAAGCGGAAGCGGGGUUGUG   1   |||||||=|||||||||||||||| targets:32   GCAUCUUUGCCUUCGCCCCAACAC   55 Target Full Sequence	1.0	Sequence 7860 from Patent EP2559767	NA	coding protein	psRNATarget
HI409735.1	ncRNA:24   CGUAGAAGCGGAAGCGGGGUUGUG   1   |||||||=|||||||||||||||| targets:32   GCAUCUUUGCCUUCGCCCCAACAC   55 Target Full Sequence	1.0	Sequence 7860 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241865.1	ncRNA:24   CGUAGAAGCGGAAGCGGGGUUGUG   1   |||||||=|||||||||||||||| targets:32   GCAUCUUUGCCUUCGCCCCAACAC   55 Target Full Sequence	1.0	Sequence 7860 from Patent EP2985353	NA	coding protein	psRNATarget
EU942999.1	ncRNA:24   CGUAGAAGCGGAAGCGGGGUUGUG   1   ||=||||||||||||||||||||= targets:55   GCGUCUUCGCCUUCGCCCCAACAU   78 Target Full Sequence	1.0	Zea mays clone 1551860 mRNA sequence	NA	coding protein	psRNATarget
EZ074525.1	ncRNA:24   CGUAGAAGCGGAAGCGGGGUUGUG   1   ||=||||||||||||=|||||||= targets:60   GCGUCUUCGCCUUCGUCCCAACAU   83 Target Full Sequence	2.5	TSA: Zea mays contig10162, mRNA sequence	NA	coding protein	psRNATarget
XM_008677903.1	ncRNA:24   CGUAGAAGCGGAAGCGGGGUUGUG   1   ||=|*||||||||||||||||=|* targets:236   GCGUGUUCGCCUUCGCCCCAAUAG   259 Target Full Sequence	2.5	PREDICTED: Zea mays 4-coumarate--CoA ligase-like 2 (LOC103652288), mRNA	NA	coding protein	psRNATarget