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BaseInfo

ncRNA ID novel_zma_miR13790
Species Zea mays
Class miRNA
Genome position Chr8:164543236-164543310 [-]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 1 - ACAGCUGAGAAAAAACACGACUAA - 24
Stem-loop(if miRNA) --                 A      C     AAUAC
  AGUCGUGUUUUUUCUCA CUGUGC CUUCU     U
  ||||||||||||||||| |||||| |||||     A
  UCAGCACAAAAAAGAGU GACAUG GAAGA     U
AA                 C      U     CAAGA
Stem-loop sequence AGUCGUGUUUUUUCUCAACUGUGCCCUUCUAAUACUAUAGAACAGAAGUGUACAGCUGAGAAAAAACACGACUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ076008.1
ncRNA:24   AAUCAGCACAAAAAA-GAGUCGACA   1
  |||||||||||||||-|||||||||
targets:53   UUAGUCGUGUUUUUUGCUCAGCUGU   77

3.0 TSA: Zea mays contig11645, mRNA sequence NA coding protein psRNATarget