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BaseInfo

ncRNA ID	novel_zma_miR13789
Species	Zea mays
Class	miRNA
Genome position	Chr6:106139122-106139224 [+]
Reference genome	RefGen_v4
Source	SRR1583942
Length	21
Mature sequence(if miRNA)	83 - GAUUUAAAAUGUGCAUGUGAG - 103
Stem-loop(if miRNA)	--                U                      AAAU    GAU   CACAUGCACAUUUUAA UCUAGGACAUCCAUCUAACAUC    AUGG   G   |||||||||||||||| ||||||||||||||||||||||    ||||   U   GUGUACGUGUAAAAUU AGAUCCUGUAGGUAGAUUGUAG    UGCC   A GA                U                      --GU    AUU
Stem-loop sequence	CACAUGCACAUUUUAAUUCUAGGACAUCCAUCUAACAUCAAAUAUGGGAUGUAUUACCGUUGGAUGUUAGAUGGAUGUCCUAGAUUUAAAAUGUGCAUGUGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008645476.2	ncRNA:21   GAGUGUACGUGUAAAAUUUAG   1   ||||==||||||||||||||| targets:761   CUCAUGUGCACAUUUUAAAUC   781 Target Full Sequence	2.0	PREDICTED: Zea mays tic20-like protein (LOC100282929), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008661794.2	ncRNA:21   GAGUGUACGUGUAAAAUUUAG   1   ||||*=|*||||||||||||| targets:913   CUCAAGUACACAUUUUAAAUC   933 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008661793.2	ncRNA:21   GAGUGUACGUGUAAAAUUUAG   1   ||||*=|*||||||||||||| targets:904   CUCAAGUACACAUUUUAAAUC   924 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X1, mRNA	NA	coding protein	psRNATarget