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BaseInfo

ncRNA ID osa-miRf10975-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GACUUGAACCCAUGACCUCGU - NA
Stem-loop(if miRNA) CUC       A                   UC   C AAAAA
   UUAUCCA GAGGUCAUGGGUUCAAGUC  CAU C     A
   ||||||| |||||||||||||||||||  ||| |
   AAUGGGU CUCCAGUACCCAAGUUCAG  GUA G     U
GAA       G                   GA   A AGAAU
Stem-loop sequence CUCUUAUCCAAGAGGUCAUGGGUUCAAGUCUCCAUCCAAAAAAUUAAGAGAAUGAGGACUUGAACCCAUGACCUCGUGGGUAAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288739.1
ncRNA:21   UGCUCCAGUACCCAAGUUCAG   1
  |=|||||||||||||||||||
targets:772   AUGAGGUCAUGGGUUCAAGUC   792

0.0 Oryza sativa Japonica Group cDNA, clone: J090063N20, full insert sequence NA coding protein psRNATarget
XM_015759490.1
ncRNA:21   UGCUCCAGUACCCAAGUUCAG   1
  |||||||||||||||||*|||
targets:1125   ACGAGGUCAUGGGUUCACGUC   1145

1.5 PREDICTED: Oryza sativa Japonica Group putative disease resistance protein RGA3 (LOC9270182), mRNA putative disease resistance protein RGA3(LOC9270182) coding protein psRNATarget
CT836126.1
ncRNA:21   UGCUCCAGUACCCAAGUUCAG   1
  |=|||*||||*||||||||||
targets:527   AUGAGAUCAUAGGUUCAAGUC   547

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA223B16, full insert sequence NA coding protein psRNATarget